ggKbase home page

A1-16-all-fractions_k255_2440211

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_2440211_1
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..239
DNA (237bp) protein (79aa)
flavoprotein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037A2ACC
flavoprotein
Flavoprotein {ECO:0000313|EMBL:EOD64111.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
A1-16-all-fractions_k255_2440211_2
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(293..802)
DNA (510bp) protein (170aa)
Putative GCN5-related N-acetyltransferase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HAD1_ACTM4
putative GCN5-related N-acetyltransferase
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:BAL89968.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
A1-16-all-fractions_k255_2440211_3
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(815..1939)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037715EC
Beta-lactamase {ECO:0000313|EMBL:KDN17066.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
beta-lactamase class C
A1-16-all-fractions_k255_2440211_4
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2131..2820
DNA (690bp) protein (230aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HY75_9PSEU
rpe; ribulose-phosphate 3-epimerase
A1-16-all-fractions_k255_2440211_5
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2896..3525
DNA (630bp) protein (210aa)
Riboflavin synthase alpha chain n=3 Tax=Amycolatopsis mediterranei RepID=D8HZH7_AMYMU
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KDN17062.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
ribE; riboflavin synthase alpha chain
A1-16-all-fractions_k255_2440211_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3522..4844
DNA (1323bp) protein (441aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G158_9PSEU
ribA; GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
A1-16-all-fractions_k255_2440211_7
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4841..5347
DNA (507bp) protein (169aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I486_9PSEU
riboflavin synthase subunit beta
A1-16-all-fractions_k255_2440211_8
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5350..5793
DNA (444bp) protein (148aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0G9P8_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK41309.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
A1-16-all-fractions_k255_2440211_9
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5786..6580)
DNA (795bp) protein (265aa)
exodeoxyribonuclease III n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003691670
Exodeoxyribonuclease III {ECO:0000313|EMBL:KDN17058.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
xthA; exodeoxyribonuclease III
A1-16-all-fractions_k255_2440211_10
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6720..7538
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000379587A
LigA {ECO:0000313|EMBL:EGD42970.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
A1-16-all-fractions_k255_2440211_11
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7594..8316)
DNA (723bp) protein (241aa)
Trypsin-like serine protease n=3 Tax=Amycolatopsis mediterranei RepID=D8HZI2_AMYMU
trypsin-like serine protease
Trypsin-like serine protease {ECO:0000313|EMBL:AEK41311.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
A1-16-all-fractions_k255_2440211_12
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8452..10422
DNA (1971bp) protein (657aa)
UvrABC system protein C n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z417_9PSEU
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
uvrC; UvrABC system protein C
A1-16-all-fractions_k255_2440211_13
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10484..11329
DNA (846bp) protein (282aa)
UPF0042 nucleotide-binding protein SSMG_02276 n=2 Tax=Actinomycetales RepID=D9UZD3_9ACTO
Nucleotide-binding protein SSMG_02276 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
UPF0042 nucleotide-binding protein
A1-16-all-fractions_k255_2440211_14
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11334..12320
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000365AF0E
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
A1-16-all-fractions_k255_2440211_15
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12320..13306
DNA (987bp) protein (329aa)
sporulation protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036C2B3C
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
A1-16-all-fractions_k255_2440211_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13314..13727)
DNA (414bp) protein (138aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIV6_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA22935.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A1-16-all-fractions_k255_2440211_17
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13828..13950
DNA (123bp) protein (41aa)
50S ribosomal protein L36 n=3 Tax=Amycolatopsis mediterranei RepID=D8HN25_AMYMU
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000313|EMBL:AEK44595.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
A1-16-all-fractions_k255_2440211_18
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14066..15457)
DNA (1392bp) protein (464aa)
Possible oxidoreductase n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M4E9_9NOCA
Possible oxidoreductase {ECO:0000313|EMBL:CCW11811.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
oxidoreductase
A1-16-all-fractions_k255_2440211_19
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15525..18488)
DNA (2964bp) protein (988aa)
SARP family transcriptional regulator n=1 Tax=Amycolatopsis balhimycina RepID=UPI000365C2DA
SARP family transcriptional regulator fused with ATPase domain
SARP family transcriptional regulator fused with ATPase domain {ECO:0000313|EMBL:AEK41230.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
A1-16-all-fractions_k255_2440211_20
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18608..21166)
DNA (2559bp) protein (853aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HHY8_9PSEU
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:EOD63205.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
glucose/sorbosone dehydrogenase
A1-16-all-fractions_k255_2440211_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21363..21797)
DNA (435bp) protein (145aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Streptomyces sp. AA4 RepID=D9UZD8_9ACTO
pyridoxamine 5'-phosphate oxidase
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:EFL06610.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
A1-16-all-fractions_k255_2440211_22
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21860..22573
DNA (714bp) protein (238aa)
Membrane protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I6J4_9PSEU
Membrane protein {ECO:0000313|EMBL:KDN17045.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
membrane protein
Displaying 22 items

View Taxonomy