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A1-16-all-fractions_k255_1138432

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_1138432_1
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..414)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Thermobifida fusca RepID=R9FH96_THEFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ54685.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
A1-16-all-fractions_k255_1138432_2
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

548..1600
DNA (1053bp) protein (351aa)
Putative ABC transporter permease protein n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TJD8_9ACTO
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAB33596.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.;"
ABC transporter
A1-16-all-fractions_k255_1138432_3
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1597..2415
DNA (819bp) protein (273aa)
ABC transporter n=1 Tax=Humibacter albus RepID=UPI0003B5BF85
ABC transporter
Tax=RBG_16_Actinobacteria_68_21_curated
A1-16-all-fractions_k255_1138432_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2421..3284
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003051FFC
ABC-type transporter, ATP-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
A1-16-all-fractions_k255_1138432_5
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3326..3856
DNA (531bp) protein (177aa)
TetR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI0003807DBC
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY99990.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A1-16-all-fractions_k255_1138432_6
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3872..6193)
DNA (2322bp) protein (774aa)
ATP-dependent DNA helicase RecG n=2 Tax=Thermobifida fusca RepID=Q47S83_THEFY
ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AAZ54684.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
A1-16-all-fractions_k255_1138432_7
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6335..6520
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=2 Tax=Nocardiopsis RepID=D7AU98_NOCDD
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
A1-16-all-fractions_k255_1138432_8
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6900..8000)
DNA (1101bp) protein (367aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
thiamine-monophosphate kinase (EC:2.7.4.16)
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI00034D6B35
A1-16-all-fractions_k255_1138432_9
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8594..8827
DNA (234bp) protein (78aa)
Transcriptional regulator, AsnC family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB39_THECD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACY98982.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A1-16-all-fractions_k255_1138432_10
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8944..9780)
DNA (837bp) protein (279aa)
cofC; 2-phospho-L-lactate guanylyltransferase (EC:2.7.7.68)
2-phospho-L-lactate guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000255|HAMAP-Rule:MF_02114};; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
2-phospho-L-lactate guanylyltransferase n=3 Tax=Streptomyces RepID=COFC_STRCO
A1-16-all-fractions_k255_1138432_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9816..10676
DNA (861bp) protein (287aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB52_THECD
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ACY98995.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A1-16-all-fractions_k255_1138432_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10768..11775
DNA (1008bp) protein (336aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N6Z3_9ACTO
A1-16-all-fractions_k255_1138432_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11822..13048
DNA (1227bp) protein (409aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase n=1 Tax=Thermobifida fusca TM51 RepID=R9FH80_THEFU
Cystathionine gamma-synthase {ECO:0000313|EMBL:ETK31797.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
A1-16-all-fractions_k255_1138432_14
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13238..14371
DNA (1134bp) protein (378aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000370925B
A1-16-all-fractions_k255_1138432_15
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14463..14780)
DNA (318bp) protein (106aa)
Histone-like bacterial DNA-binding protein n=2 Tax=Thermobifida fusca RepID=Q47SA1_THEFY
histone-like DNA-binding protein
Histone-like bacterial DNA-binding protein {ECO:0000313|EMBL:AAZ54666.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
A1-16-all-fractions_k255_1138432_16
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15074..15679)
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
isopropylmalate isomerase n=1 Tax=Actinomadura atramentaria RepID=UPI00036AF9E1
3-isopropylmalate dehydratase small subunit
A1-16-all-fractions_k255_1138432_17
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15825..17252)
DNA (1428bp) protein (476aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB58_THECD
3-isopropylmalate dehydratase large subunit
A1-16-all-fractions_k255_1138432_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17434..18303
DNA (870bp) protein (290aa)
IclR family transcriptional regulator n=1 Tax=Nonomuraea coxensis RepID=UPI000361B127
IclR family transcriptional regulator {ECO:0000313|EMBL:ETK31871.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
IclR family transcriptional regulator
A1-16-all-fractions_k255_1138432_19
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18622..20016
DNA (1395bp) protein (465aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B45097
alanine dehydrogenase
Alanine dehydrogenase/PNT-like {ECO:0000313|EMBL:ABD12304.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
A1-16-all-fractions_k255_1138432_20
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20019..20372
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003631CF8
NAD/NADP transhydrogenase alpha subunit-like protein
Uncharacterized protein {ECO:0000313|EMBL:ETA01110.1}; Flags: Precursor;; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
Displaying 20 items

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