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A1-16-all-fractions_metab_12

wsip-metawrap-drep-bins_Actinobacteria_71_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 251-300 of 1126 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A1-16-all-fractions_k255_1040016
Class: Actinobacteria (100%)
3 2607 bp 69.77 0.75 78.94
A1-16-all-fractions_k255_3323710
Species: Thermomonospora curvata (66.67%)
3 3830 bp 69.66 0.20 98.93
A1-16-all-fractions_k255_4446344
Class: Actinobacteria (66.67%)
3 1873 bp 72.08 2.80 98.02
A1-16-all-fractions_k255_1040827
Class: Actinobacteria (66.67%)
3 1744 bp 69.84 2.41 86.87
A1-16-all-fractions_k255_3329967
Class: Actinobacteria (100%)
3 2175 bp 70.67 0.41 95.03
A1-16-all-fractions_k255_3331432
Domain: Bacteria (66.67%)
3 1582 bp 70.92 0.57 99.94
A1-16-all-fractions_k255_2175097
Order: Streptosporangiales (66.67%)
3 2362 bp 69.39 0.70 75.06
A1-16-all-fractions_k255_1052162
Domain: Bacteria (66.67%)
3 2051 bp 65.87 0.44 89.37
A1-16-all-fractions_k255_2178557
Genus: Streptomyces (66.67%)
3 3090 bp 71.72 0.44 79.22
A1-16-all-fractions_k255_4461982
Class: Actinobacteria (100%)
3 2995 bp 68.91 0.40 73.92
A1-16-all-fractions_k255_1084318 3 3674 bp 70.69 0.65 93.17
A1-16-all-fractions_k255_1088990
Species: uncultured soil bacterium (66.67%)
3 2933 bp 67.85 0.61 97.89
A1-16-all-fractions_k255_2208271
Phylum: Actinobacteria (66.67%)
3 2214 bp 67.62 0.34 86.59
A1-16-all-fractions_k255_1098485
Genus: Streptomyces (66.67%)
3 1554 bp 72.39 0.00 84.94
A1-16-all-fractions_k255_2214478
Order: Streptosporangiales (100%)
3 3589 bp 70.10 0.38 87.60
A1-16-all-fractions_k255_3367417
Phylum: Actinobacteria (66.67%)
3 2210 bp 69.91 0.41 91.76
A1-16-all-fractions_k255_3367897
Class: Actinobacteria (66.67%)
3 2756 bp 70.32 0.22 81.42
A1-16-all-fractions_k255_1103055
Class: Actinobacteria (66.67%)
3 4415 bp 70.85 0.34 87.86
A1-16-all-fractions_k255_2232712
Domain: Bacteria (100%)
3 2457 bp 72.28 0.61 82.66
A1-16-all-fractions_k255_3368922 3 2000 bp 71.35 0.45 78.60
A1-16-all-fractions_k255_2249896
Class: Actinobacteria (100%)
3 2527 bp 68.54 1.13 72.06
A1-16-all-fractions_k255_3385115
Class: Actinobacteria (66.67%)
3 2733 bp 70.95 1.10 91.55
A1-16-all-fractions_k255_4552204
Species: Frankia sp. EuI1c (66.67%)
3 2093 bp 73.48 1.08 95.75
A1-16-all-fractions_k255_1125634
Species: RBG_16_Actinobacteria_68_12_curated (66.67%)
3 1956 bp 69.84 1.15 65.80
A1-16-all-fractions_k255_4559599
Class: Actinobacteria (66.67%)
3 2077 bp 69.23 2.53 85.07
A1-16-all-fractions_k255_2283970
Order: Streptosporangiales (66.67%)
3 3141 bp 72.05 0.67 87.77
A1-16-all-fractions_k255_3411654
Class: Actinobacteria (100%)
3 3091 bp 71.40 0.49 80.65
A1-16-all-fractions_k255_1156113
Class: Actinobacteria (66.67%)
3 2237 bp 70.36 0.13 91.60
A1-16-all-fractions_k255_1158968
Order: Micromonosporales (66.67%)
3 3221 bp 70.48 0.42 85.41
A1-16-all-fractions_k255_2309124
Species: Conexibacter woesei (66.67%)
3 1887 bp 72.66 0.79 100.00
A1-16-all-fractions_k255_1161242
Class: Actinobacteria (100%)
3 3030 bp 70.69 0.35 90.79
A1-16-all-fractions_k255_2319202
Phylum: Actinobacteria (66.67%)
3 2632 bp 71.43 0.57 88.79
A1-16-all-fractions_k255_1175956
Order: Streptomycetales (66.67%)
3 3399 bp 71.61 0.40 97.00
A1-16-all-fractions_k255_2327322
Order: Micrococcales (66.67%)
3 2504 bp 70.81 0.72 86.02
A1-16-all-fractions_k255_3454794
Class: Actinobacteria (66.67%)
3 1936 bp 70.40 2.32 94.52
A1-16-all-fractions_k255_4610883
Class: Actinobacteria (100%)
3 2394 bp 70.43 0.75 89.60
A1-16-all-fractions_k255_3461460
Class: Actinobacteria (66.67%)
3 1988 bp 71.68 1.13 84.66
A1-16-all-fractions_k255_3466300
Order: Streptosporangiales (66.67%)
3 2344 bp 70.09 0.90 95.73
A1-16-all-fractions_k255_1199672
Species: Thermomonospora curvata (66.67%)
3 2371 bp 66.98 0.32 85.15
A1-16-all-fractions_k255_2349227
Genus: Mycobacterium (100%)
3 4274 bp 72.02 0.63 84.37
A1-16-all-fractions_k255_3503094
Order: Streptosporangiales (66.67%)
3 2930 bp 67.65 0.31 79.15
A1-16-all-fractions_k255_4672385
Class: Actinobacteria (100%)
3 4449 bp 73.18 0.37 93.26
A1-16-all-fractions_k255_3508444 3 1988 bp 66.25 1.13 71.08
A1-16-all-fractions_k255_3511612
Domain: Bacteria (66.67%)
3 1992 bp 70.38 0.45 92.17
A1-16-all-fractions_k255_2367026
Class: Actinobacteria (66.67%)
3 1644 bp 70.01 0.55 94.89
A1-16-all-fractions_k255_3514690
Class: Actinobacteria (100%)
3 2632 bp 72.34 0.63 87.65
A1-16-all-fractions_k255_4691508
Order: Streptosporangiales (66.67%)
3 3495 bp 68.56 0.99 93.91
A1-16-all-fractions_k255_4691833
Class: Actinobacteria (66.67%)
3 3085 bp 71.47 0.39 95.88
A1-16-all-fractions_k255_3521939
Class: Actinobacteria (100%)
3 2340 bp 72.74 0.19 77.05
A1-16-all-fractions_k255_1269401
Class: Actinobacteria (66.67%)
3 2495 bp 71.78 0.78 84.05
Displaying items 251-300 of 1126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.