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A1-16-all-fractions_metab_12

wsip-metawrap-drep-bins_Actinobacteria_71_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.66 Longest contig: 21.82 Kbp Bin length: 5.34 Mbp GC content: 70.72 %
Contigs count: 1126 Features count: 5687 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Displaying items 1-50 of 1126 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A1-16-all-fractions_k255_4008091
Class: Actinobacteria (95.24%)
21 21824 bp 70.26 0.55 90.95
A1-16-all-fractions_k255_1138432
Order: Streptosporangiales (55%)
20 20373 bp 70.69 0.74 86.20
A1-16-all-fractions_k255_865050
Class: Actinobacteria (70.59%)
17 19434 bp 69.92 0.56 91.94
A1-16-all-fractions_k255_3961213
Class: Actinobacteria (88.89%)
18 18526 bp 71.28 0.90 88.50
A1-16-all-fractions_k255_4719620
Class: Actinobacteria (87.5%)
16 18127 bp 70.66 1.38 91.79
A1-16-all-fractions_k255_2527950
Class: Actinobacteria (50%)
18 18026 bp 71.59 0.74 90.04
A1-16-all-fractions_k255_4060299
Class: Actinobacteria (81.25%)
16 17978 bp 71.21 0.55 90.81
A1-16-all-fractions_k255_2939787
Class: Actinobacteria (81.25%)
16 17606 bp 71.39 0.70 86.77
A1-16-all-fractions_k255_2879472
Class: Actinobacteria (73.33%)
15 17153 bp 70.88 0.71 87.96
A1-16-all-fractions_k255_402334
Class: Actinobacteria (57.14%)
14 17020 bp 72.15 1.04 95.15
A1-16-all-fractions_k255_2686700
Class: Actinobacteria (68.42%)
19 16979 bp 70.48 0.31 88.42
A1-16-all-fractions_k255_1676719
Class: Actinobacteria (91.67%)
12 16953 bp 70.48 0.66 85.51
A1-16-all-fractions_k255_2258614
Class: Actinobacteria (100%)
15 16767 bp 71.39 0.47 87.67
A1-16-all-fractions_k255_4286579
Order: Streptosporangiales (60%)
20 16566 bp 70.37 0.54 93.32
A1-16-all-fractions_k255_737092
Class: Actinobacteria (93.75%)
16 15851 bp 71.06 0.62 86.42
A1-16-all-fractions_k255_395577
Class: Actinobacteria (75%)
16 15728 bp 68.81 0.53 87.38
A1-16-all-fractions_k255_1975014
Phylum: Actinobacteria (60%)
15 15497 bp 70.16 0.55 90.25
A1-16-all-fractions_k255_3579761
Class: Actinobacteria (93.33%)
15 15228 bp 71.99 0.47 92.22
A1-16-all-fractions_k255_2233977
Class: Actinobacteria (92.86%)
14 15216 bp 70.50 0.60 87.74
A1-16-all-fractions_k255_2620475
Class: Actinobacteria (92.86%)
14 15065 bp 70.05 0.77 90.63
A1-16-all-fractions_k255_3174116
Class: Actinobacteria (91.67%)
12 15046 bp 69.81 0.40 94.43
A1-16-all-fractions_k255_4999032
Order: Streptosporangiales (50%)
14 15003 bp 69.94 0.70 90.48
A1-16-all-fractions_k255_1679964
Class: Actinobacteria (86.67%)
15 14996 bp 69.56 0.87 83.62
A1-16-all-fractions_k255_3952467
Class: Actinobacteria (90.91%)
11 14727 bp 71.60 0.63 87.53
A1-16-all-fractions_k255_26453
Class: Actinobacteria (50%)
14 14689 bp 70.67 0.50 89.78
A1-16-all-fractions_k255_3070163
Class: Actinobacteria (91.67%)
12 14607 bp 70.83 0.66 99.49
A1-16-all-fractions_k255_1778094
Class: Actinobacteria (75%)
12 14577 bp 72.24 0.69 91.69
A1-16-all-fractions_k255_4869007
Order: Streptosporangiales (75%)
12 14535 bp 72.14 0.90 89.87
A1-16-all-fractions_k255_3505099
Class: Actinobacteria (53.85%)
13 14335 bp 74.04 0.57 94.38
A1-16-all-fractions_k255_2766445
Class: Actinobacteria (72.73%)
11 14238 bp 72.07 0.76 91.59
A1-16-all-fractions_k255_433650
Class: Actinobacteria (93.33%)
15 14226 bp 70.92 0.70 88.63
A1-16-all-fractions_k255_1289265
Class: Actinobacteria (100%)
9 14168 bp 70.73 0.64 93.36
A1-16-all-fractions_k255_64770
Class: Actinobacteria (92.31%)
13 14153 bp 70.68 0.84 88.60
A1-16-all-fractions_k255_473489
Class: Actinobacteria (86.67%)
15 14123 bp 70.42 0.45 92.49
A1-16-all-fractions_k255_1687074
Domain: Bacteria (58.33%)
12 14030 bp 69.70 0.64 84.29
A1-16-all-fractions_k255_4818150
Phylum: Actinobacteria (50%)
14 13918 bp 71.46 0.71 91.78
A1-16-all-fractions_k255_658093
Class: Actinobacteria (93.33%)
15 13894 bp 70.53 0.77 86.15
A1-16-all-fractions_k255_4943022
Class: Actinobacteria (86.67%)
15 13745 bp 70.98 0.62 84.84
A1-16-all-fractions_k255_1156461
Genus: Streptomyces (50%)
10 13733 bp 70.14 0.60 91.03
A1-16-all-fractions_k255_4841662
Class: Actinobacteria (80%)
10 13699 bp 72.04 0.64 94.63
A1-16-all-fractions_k255_5056948
Class: Actinobacteria (86.67%)
15 13689 bp 70.71 0.35 83.10
A1-16-all-fractions_k255_423841
Class: Actinobacteria (64.71%)
17 13661 bp 72.27 0.43 91.71
A1-16-all-fractions_k255_1930976
Class: Actinobacteria (60%)
10 13661 bp 72.10 0.46 92.72
A1-16-all-fractions_k255_3371891
Class: Actinobacteria (90.91%)
11 13586 bp 70.06 0.32 93.67
A1-16-all-fractions_k255_2877989
Order: Streptosporangiales (53.85%)
13 13552 bp 70.73 0.55 91.03
A1-16-all-fractions_k255_1604101
Class: Actinobacteria (92.31%)
13 13534 bp 71.24 0.53 89.80
A1-16-all-fractions_k255_685644
Class: Actinobacteria (100%)
12 13503 bp 71.14 0.64 92.71
A1-16-all-fractions_k255_2801269
Class: Actinobacteria (71.43%)
14 13475 bp 70.98 0.49 89.86
A1-16-all-fractions_k255_3437184
Class: Actinobacteria (70%)
10 13426 bp 69.48 0.45 84.19
A1-16-all-fractions_k255_4146245
Order: Streptosporangiales (50%)
10 13252 bp 72.96 0.61 91.96
Displaying items 1-50 of 1126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.