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A1-16-all-fractions_k255_128569

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_128569_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..2436
-----------------
DNA (2436bp)
protein (812aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Aconitate hydratase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWI8_9ACTO
acnA; putative aconitate hydratase
A1-16-all-fractions_k255_128569_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(2497..2901)
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein id=14630374 bin=bin8_Chloro species=Streptomyces hygroscopicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
cyclase
Tax=CSP1_4_Chloroflexi
A1-16-all-fractions_k255_128569_3
RLO_PLX_64_10, Bacteria

Not on your lists

3005..4273
-----------------
DNA (1269bp)
protein (423aa)
Adenylate/guanylate cyclase id=3293340 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
diguanylate cyclase and serine/threonine protein kinase with TPR repeats
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
A1-16-all-fractions_k255_128569_4
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4353..5657
-----------------
DNA (1305bp)
protein (435aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17293.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5644..6138
-----------------
DNA (495bp)
protein (165aa)
Sigma-70 region 4 domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKP0_NOCSJ
sigma-70 region 4 domain-containing protein
Sigma-70 region 4 domain protein {ECO:0000313|EMBL:ABL82375.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A1-16-all-fractions_k255_128569_6
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6155..6667)
-----------------
DNA (513bp)
protein (171aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036BC064
Kitasatospora griseola strain MF730-N6 RKJC_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ67148.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
copper resistance protein D
A1-16-all-fractions_k255_128569_7
unknown

Not on your lists

comp(6700..6834)
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

A1-16-all-fractions_k255_128569_8
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

6943..7635
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1FB68_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15713324}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
A1-16-all-fractions_k255_128569_9
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7699..8772
-----------------
DNA (1074bp)
protein (358aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00036B75AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE61089.1}; TaxID=796606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus MGA3.;"
A1-16-all-fractions_k255_128569_10
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8795..9226
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003704774
Putative hydrolase, NUDIX family {ECO:0000313|EMBL:EGD42611.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
A1-16-all-fractions_k255_128569_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9280..11202
-----------------
DNA (1923bp)
protein (641aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UWF1_9ACTO
1-deoxy-D-xylulose-5-phosphate synthase
A1-16-all-fractions_k255_128569_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11511..12425
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWC6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17304.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12454..13404
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKL9_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:AIY19886.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
proteasome protein
A1-16-all-fractions_k255_128569_14
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13401..14261
-----------------
DNA (861bp)
protein (287aa)
Acyl-CoA thioesterase II {ECO:0000313|EMBL:AIY19887.2}; EC=3.1.2.- {ECO:0000313|EMBL:AIY19887.2};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Palmitoyl-CoA hydrolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKL7_NOCSJ
acyl-CoA thioesterase
A1-16-all-fractions_k255_128569_15
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14402..15244)
-----------------
DNA (843bp)
protein (281aa)
MaoC domain protein dehydratase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKL6_NOCSJ
Acyl dehydratase {ECO:0000313|EMBL:AIY19888.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
dehydratase
A1-16-all-fractions_k255_128569_16
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15246..16580)
-----------------
DNA (1335bp)
protein (445aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AIY17305.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AIY17305.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
3-ketoacyl-ACP reductase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037FE3AC
A1-16-all-fractions_k255_128569_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16738..18018
-----------------
DNA (1281bp)
protein (427aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AIY17306.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AIY17306.1};; EC=2.3.1.9 {ECO:0000313|EMBL:AIY17306.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
3-ketoacyl-CoA thiolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKL4_NOCSJ
A1-16-all-fractions_k255_128569_18
unknown

Not on your lists

18189..18569
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

A1-16-all-fractions_k255_128569_19
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18589..19275)
-----------------
DNA (687bp)
protein (229aa)
Transcriptional regulator, TetR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKL3_NOCSJ
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY17307.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19341..20861)
-----------------
DNA (1521bp)
protein (507aa)
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617, ECO:0000313|EMBL:AIY17311.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003732FE8
hypothetical protein
A1-16-all-fractions_k255_128569_21
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20866..21471)
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI0003716C8A
hypothetical protein
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY17312.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_22
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21601..22539
-----------------
DNA (939bp)
protein (313aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWU6_9ACTO
3-methyladenine DNA glycosylase
Uncharacterized protein {ECO:0000313|EMBL:AIY17313.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_23
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22663..23487
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SCQ3_9ACTO
ABC transporter
Conserved hypothetical integral membrane protein YrbE1A {ECO:0000313|EMBL:AIY17315.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23487..24356
-----------------
DNA (870bp)
protein (290aa)
UPI0003C7DFBC related cluster n=1 Tax=unknown RepID=UPI0003C7DFBC
Conserved hypothetical integral membrane protein YrbE1B {ECO:0000313|EMBL:AIY19889.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
ABC transporter permease
A1-16-all-fractions_k255_128569_25
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24365..25423
-----------------
DNA (1059bp)
protein (353aa)
Virulence factor Mce family protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SCQ5_9ACTO
MCE-family protein Mce1A {ECO:0000313|EMBL:AJR18379.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
A1-16-all-fractions_k255_128569_26
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25420..26424
-----------------
DNA (1005bp)
protein (335aa)
Virulence factor Mce family protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SCQ6_9ACTO
hypothetical protein
MCE-family protein Mce1B {ECO:0000313|EMBL:AIY17316.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_27
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26421..27377
-----------------
DNA (957bp)
protein (319aa)
Virulence factor Mce family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UWP4_9ACTO
hypothetical protein
MCE-family protein Mce1C {ECO:0000313|EMBL:AIY17317.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_28
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27382..28410
-----------------
DNA (1029bp)
protein (343aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037483DD
hypothetical protein
MCE-family protein Mce1D {ECO:0000313|EMBL:AIY17318.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_128569_29
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28413..29603
-----------------
DNA (1191bp)
protein (397aa)
Virulence factor Mce family protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SCQ9_9ACTO
MCE-family lipoprotein LprK (MCE-family lipoprotein Mce1e) {ECO:0000313|EMBL:AIY17319.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
A1-16-all-fractions_k255_128569_30
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29605..30693
-----------------
DNA (1089bp)
protein (363aa)
Virulence factor Mce family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UWP1_9ACTO
MCE-family protein Mce1F {ECO:0000313|EMBL:AJR18380.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
virulence factor Mce family protein
Displaying items 1-30 of 51 in total

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