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A1-16-all-fractions_k255_2869270

Search features with annotation key words

Displaying items 1-30 of 339 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_2869270_1
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35..1405)
-----------------
DNA (1371bp)
protein (457aa)
Peptidase M16 domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLJ3_NOCSJ
zinc protease
Peptidase, M16 family {ECO:0000313|EMBL:AIY17117.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_2869270_2
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1413..3668)
-----------------
DNA (2256bp)
protein (752aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V1T7_9ACTO
polynucleotide phosphorylase
A1-16-all-fractions_k255_2869270_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3817..4092)
-----------------
DNA (276bp)
protein (92aa)
30S ribosomal protein S15 n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003710421
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_2869270_4
unknown

Not on your lists

4325..5044
-----------------
DNA (720bp)
protein (240aa)

This feature has no annotations

A1-16-all-fractions_k255_2869270_5
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5041..6264)
-----------------
DNA (1224bp)
protein (408aa)
Putative sulfite oxidase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V1T8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJR10903.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
A1-16-all-fractions_k255_2869270_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6315..7274)
-----------------
DNA (960bp)
protein (320aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:AIY17109.2};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:AIY17109.2};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Riboflavin kinase / FMN adenylyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVC4_9ACTO
riboflavin kinase
A1-16-all-fractions_k255_2869270_7
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7271..8137)
-----------------
DNA (867bp)
protein (289aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V1U6_9ACTO
A1-16-all-fractions_k255_2869270_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8134..8604)
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003657E69
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ribosome-binding factor A
A1-16-all-fractions_k255_2869270_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8726..11602)
-----------------
DNA (2877bp)
protein (959aa)
translation initiation factor IF-2 n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003734F55
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
translation initiation factor IF-2
A1-16-all-fractions_k255_2869270_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12138..13118)
-----------------
DNA (981bp)
protein (327aa)
Transcription termination factor NusA n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLK9_NOCSJ
transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_2869270_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13120..13605)
-----------------
DNA (486bp)
protein (162aa)
Ribosome maturation factor RimP n=1 Tax=Nocardioides sp. CF8 RepID=R7XWC4_9ACTO
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
A1-16-all-fractions_k255_2869270_12
unknown

Not on your lists

13699..14175
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein
A1-16-all-fractions_k255_2869270_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14172..14594
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLL2_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:AJR18339.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
A1-16-all-fractions_k255_2869270_14
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14848..15564)
-----------------
DNA (717bp)
protein (239aa)
HAD-superfamily hydrolase, subfamily IA n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V1V5_9ACTO
haloacid dehalogenase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:AIY19860.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_2869270_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15575..16447)
-----------------
DNA (873bp)
protein (291aa)
Alpha/beta hydrolase fold protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1R5_CONWI
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB54096.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
A1-16-all-fractions_k255_2869270_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16502..17104
-----------------
DNA (603bp)
protein (201aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1R4_CONWI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB54095.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
A1-16-all-fractions_k255_2869270_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17121..18896)
-----------------
DNA (1776bp)
protein (592aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Proline--tRNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWC7_9ACTO
prolyl-tRNA synthetase
A1-16-all-fractions_k255_2869270_18
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18992..19954
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037DD8BD
diguanylate cyclase
Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
A1-16-all-fractions_k255_2869270_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19903..20271)
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037BAE99
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EWT00341.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
A1-16-all-fractions_k255_2869270_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20280..21125)
-----------------
DNA (846bp)
protein (282aa)
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLL5_NOCSJ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIY17095.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
GCN5 family acetyltransferase
A1-16-all-fractions_k255_2869270_21
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21298..22206
-----------------
DNA (909bp)
protein (303aa)
Glycosyl hydrolase family 16 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFS2_9ACTO
hypothetical protein
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:EFQ81974.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
A1-16-all-fractions_k255_2869270_22
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22330..23268
-----------------
DNA (939bp)
protein (313aa)
Beta-glucanase {ECO:0000313|EMBL:AIY19458.1}; EC=3.2.1.73 {ECO:0000313|EMBL:AIY19458.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
UPI0003C7EDDF related cluster n=1 Tax=unknown RepID=UPI0003C7EDDF
hypothetical protein
A1-16-all-fractions_k255_2869270_23
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23275..24426)
-----------------
DNA (1152bp)
protein (384aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B5DD8
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
A1-16-all-fractions_k255_2869270_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24475..25827)
-----------------
DNA (1353bp)
protein (451aa)
Peptidase M50 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLM0_NOCSJ
zinc metalloprotease
Membrane-associated zinc metalloprotease {ECO:0000313|EMBL:AIY17093.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_2869270_25
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25824..26918)
-----------------
DNA (1095bp)
protein (365aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLM1_NOCSJ
1-deoxy-D-xylulose 5-phosphate reductoisomerase
A1-16-all-fractions_k255_2869270_26
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27038..27856
-----------------
DNA (819bp)
protein (273aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:AIY17092.2}; EC=3.5.1.- {ECO:0000313|EMBL:AIY17092.2};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Polysaccharide deacetylase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLN5_NOCSJ
polysaccharide deacetylase
A1-16-all-fractions_k255_2869270_27
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27846..28766)
-----------------
DNA (921bp)
protein (307aa)
LAO/AO transport system ATPase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYN7_9ACTO
Putative periplasmic protein kinase ArgK and related GTPases of G3E family {ECO:0000313|EMBL:AIY19859.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
transporter
A1-16-all-fractions_k255_2869270_28
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28833..30068)
-----------------
DNA (1236bp)
protein (412aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AIY17091.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AIY17091.1};; EC=2.3.1.9 {ECO:0000313|EMBL:AIY17091.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Acetyl-CoA acetyltransferase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V011_9ACTO
A1-16-all-fractions_k255_2869270_29
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30161..30619
-----------------
DNA (459bp)
protein (153aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DUE5_9MICO
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EKA60120.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
A1-16-all-fractions_k255_2869270_30
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30626..31477)
-----------------
DNA (852bp)
protein (284aa)
Allophanate hydrolase 2 subunit 2 {ECO:0000313|EMBL:AIY17090.1}; EC=3.5.1.54 {ECO:0000313|EMBL:AIY17090.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Allophanate hydrolase, subunit2 n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUE9_BLASD
allophanate hydrolase
Displaying items 1-30 of 339 in total

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