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A1-16-all-fractions_k255_3137469

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_3137469_1
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..833)
DNA (831bp) protein (277aa)
Protein RecA n=1 Tax=Nocardioides sp. CF8 RepID=R7XW45_9ACTO
recombinase RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_2
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1036..1221)
DNA (186bp) protein (62aa)
PF11248 family protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2QTS0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17809.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1241..1768)
DNA (528bp) protein (176aa)
Methyltransferase type 12 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJ57_NOCSJ
methyltransferase type 12
Uncharacterized protein {ECO:0000313|EMBL:AIY17810.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_4
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1833..2636)
DNA (804bp) protein (268aa)
Carbohydrate efflux ABC transporter, permease protein, NodJ family n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9URY0_9ACTO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
ABC transporter
A1-16-all-fractions_k255_3137469_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2633..3424)
DNA (792bp) protein (264aa)
Putative ABC-2 type transporter n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9URY1_9ACTO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
ABC transporter
A1-16-all-fractions_k255_3137469_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3424..4362)
DNA (939bp) protein (313aa)
ABC transporter related protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PP41_KRIFD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB34637.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
A1-16-all-fractions_k255_3137469_7
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4382..5830)
DNA (1449bp) protein (483aa)
Modification methylase PstI {ECO:0000313|EMBL:AIY17819.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AIY17819.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWU5_9ACTN
hypothetical protein
A1-16-all-fractions_k255_3137469_8
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5848..7137
DNA (1290bp) protein (430aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00075163, ECO:0000313|EMBL:AJR18479.1}; EC=6.3.4.21 {ECO:0000256|SAAS:SAAS00075163, ECO:0000313|EMBL:AJR18479.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK86_CELFN
A1-16-all-fractions_k255_3137469_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7137..7733
DNA (597bp) protein (199aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00075163, ECO:0000313|EMBL:AJR18479.1}; EC=6.3.4.21 {ECO:0000256|SAAS:SAAS00075163, ECO:0000313|EMBL:AJR18479.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
pncA; putative pyrazinamidase / nicotinamidase (EC:3.5.1.-)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037FDC32
A1-16-all-fractions_k255_3137469_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7733..8392
DNA (660bp) protein (220aa)
Hydrolase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AYR3_RHOOB
hypothetical protein
Putative Nudix-like regulator {ECO:0000313|EMBL:AIY17820.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8432..8995)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C063_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ79249.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
A1-16-all-fractions_k255_3137469_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9136..9522
DNA (387bp) protein (129aa)
Transcriptional regulator, ArsR family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EZ60_MODMB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AIY17821.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9519..10010
DNA (492bp) protein (164aa)
Putative glutathione S-transferase-related transmembrane protein {ECO:0000313|EMBL:AIY17822.2}; EC=2.5.1.18 {ECO:0000313|EMBL:AIY17822.2};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
activator of HSP90 ATPase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE484
polyketide cyclase
A1-16-all-fractions_k255_3137469_14
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10030..10578
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ER03_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KDN17227.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
A1-16-all-fractions_k255_3137469_15
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10629..10961
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0FBP8_9NOCA
RNA methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:AIY17824.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_16

Not on your lists

comp(10907..11635)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_140 RepID=L7VW59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC71278.1}; TaxID=1256547 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_140.;"
hypothetical protein
A1-16-all-fractions_k255_3137469_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11692..16209
DNA (4518bp) protein (1506aa)
Putative ATP-dependent helicase lhr {ECO:0000313|EMBL:AIY17830.2}; EC=3.6.1.- {ECO:0000313|EMBL:AIY17830.2};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
ATP dependent helicase, Lhr family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJ49_NOCSJ
DEAD/DEAH box helicase
A1-16-all-fractions_k255_3137469_18
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16351..17232)
DNA (882bp) protein (294aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Protease HtpX homolog n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SB05_INTC7
protease HtpX
A1-16-all-fractions_k255_3137469_19
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17307..17609)
DNA (303bp) protein (101aa)
DNA-binding protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000378A93C
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17833.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17692..18165)
DNA (474bp) protein (158aa)
Competence/damage-inducible protein cinA n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJ44_NOCSJ
hypothetical protein
Molybdopterin binding motif, CinA N-terminal domain {ECO:0000313|EMBL:AIY17834.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_21
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18176..26857)
DNA (8682bp) protein (2894aa)
5'-nucleotidase {ECO:0000313|EMBL:AJR18483.1}; EC=3.1.3.5 {ECO:0000313|EMBL:AJR18483.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000379490F
yhcR; endonuclease YhcR
A1-16-all-fractions_k255_3137469_22
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27001..27630)
DNA (630bp) protein (210aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AIY17835.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AIY17835.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJ40_NOCSJ
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
A1-16-all-fractions_k255_3137469_23
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27627..29033)
DNA (1407bp) protein (469aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Nocardioides sp. CF8 RepID=R7XW85_9ACTO
ribosomal protein S12 methylthiotransferase
A1-16-all-fractions_k255_3137469_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29079..30719)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWA3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17837.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_25
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30725..33403)
DNA (2679bp) protein (893aa)
Cell division FtsK/SpoIIIE n=1 Tax=Nocardioides sp. CF8 RepID=R7XW65_9ACTO
cell division protein FtsK
Cell division protein FtsK {ECO:0000313|EMBL:AIY19963.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_26
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33585..35264)
DNA (1680bp) protein (560aa)
Beta-lactamase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJ36_NOCSJ
ribonuclease
Ribonuclease J2 (Endoribonuclease in RNA processing) {ECO:0000313|EMBL:AIY17839.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_27
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35261..36151)
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=uncultured bacterium RepID=F8UVU3_9BACT
dihydrodipicolinate synthase
A1-16-all-fractions_k255_3137469_28
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36156..37082)
DNA (927bp) protein (309aa)
Fmn-dependent monooxygenase n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2XPL4_9NOCA
F420-dependent oxidoreductase
Putative monooxygenase {ECO:0000313|EMBL:AIY17841.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_3137469_29
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37143..37814)
DNA (672bp) protein (224aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SE25_NOCSJ
peptidoglycan binding domain-containing protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ABL80060.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A1-16-all-fractions_k255_3137469_30
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37852..38880)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003687160
Uncharacterized protein {ECO:0000313|EMBL:KJR08367.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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