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A1-16-all-fractions_k255_686173_1

Organism: A1-16-all-fractions_metab_conc_40

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 1..240

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 79.0
  • Bit_score: 142
  • Evalue 2.70e-32
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 79.0
  • Bit_score: 142
  • Evalue 1.30e-31
DNA-directed RNA polymerase subunit beta n=1 Tax=Frankia sp. QA3 RepID=I9KIY4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 79.0
  • Bit_score: 142
  • Evalue 9.60e-32

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Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GGCCGCGTGAAGGTCTACGAGGCCATCGTCAAGGGCGAGAACATCCCCGAGCCGGGCATCCCCGAGTCGTTCAAGGTGCTCATCAAGGAGATGCAGTCGCTCTGCCTCAACGTCGAGGTGCTGTCCCAGGACGGCTCCCAGATCGAGCTTCGCGACGCGGACGAGGACGTCTTCCGCGCCGCCGAGGAGCTCGGCATCGACCTGTCGCGGCGCGAGAACCCCTCCGTCGAAGAAGTGTGA
PROTEIN sequence
Length: 80
GRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSQDGSQIELRDADEDVFRAAEELGIDLSRRENPSVEEV*