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A1-16-all-fractions_k255_686173

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_686173_1
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..240
-----------------
DNA (240bp)
protein (80aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Frankia sp. QA3 RepID=I9KIY4_9ACTO
A1-16-all-fractions_k255_686173_2
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

328..4158
-----------------
DNA (3831bp)
protein (1277aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003801430
DNA-directed RNA polymerase subunit beta'
A1-16-all-fractions_k255_686173_3
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4368..4676
-----------------
DNA (309bp)
protein (103aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
Pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MER2_BRAFD
transcriptional coactivator/pterin dehydratase
A1-16-all-fractions_k255_686173_4
unknown

Not on your lists

4727..5044
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

A1-16-all-fractions_k255_686173_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5100..5624
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80238.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A1-16-all-fractions_k255_686173_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5651..6913
-----------------
DNA (1263bp)
protein (421aa)
Putative oxidoreductase {ECO:0000313|EMBL:AIY16222.1}; EC=1.-.-.- {ECO:0000313|EMBL:AIY16222.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Geranylgeranyl reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK4_NOCSJ
FAD-linked oxidoreductase
A1-16-all-fractions_k255_686173_7
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7093..7965
-----------------
DNA (873bp)
protein (291aa)
NUDIX hydrolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK5_NOCSJ
NUDIX hydrolase
MutT-like domain protein {ECO:0000313|EMBL:AIY16223.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_8
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7983..9275
-----------------
DNA (1293bp)
protein (431aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:AIY16224.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AIY16224.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Iron-containing alcohol dehydrogenase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL4_NOCSJ
alcohol dehydrogenase
A1-16-all-fractions_k255_686173_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9272..11983
-----------------
DNA (2712bp)
protein (904aa)
FAD linked oxidase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL5_NOCSJ
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABL80250.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A1-16-all-fractions_k255_686173_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12225..13424
-----------------
DNA (1200bp)
protein (400aa)
Methyltransferase {ECO:0000313|EMBL:AIY16225.1}; EC=2.1.1.- {ECO:0000313|EMBL:AIY16225.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSK8_9ACTO
glutathione S-transferase
A1-16-all-fractions_k255_686173_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13424..14371
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL7_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:AJR18128.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
A1-16-all-fractions_k255_686173_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14562..15563
-----------------
DNA (1002bp)
protein (334aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80253.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A1-16-all-fractions_k255_686173_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15571..15858
-----------------
DNA (288bp)
protein (96aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00030314F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY16227.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_14
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16312..17196)
-----------------
DNA (885bp)
protein (295aa)
hypothetical protein n=1 Tax=Curtobacterium sp. B18 RepID=UPI000345688E
hypothetical protein
Putative esterase {ECO:0000313|EMBL:AIY19663.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_15
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17211..18329)
-----------------
DNA (1119bp)
protein (373aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:AIY16229.1}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:AIY16229.1};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Phosphoserine aminotransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XSK4_9ACTO
phosphoserine aminotransferase
A1-16-all-fractions_k255_686173_16
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18433..18831
-----------------
DNA (399bp)
protein (133aa)
Putative membrane protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U3E6_9PLAN
Putative membrane protein {ECO:0000313|EMBL:EMI55980.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
A1-16-all-fractions_k255_686173_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18803..19300
-----------------
DNA (498bp)
protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEM1_NOCSJ
acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIY16230.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_18
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19297..20499)
-----------------
DNA (1203bp)
protein (401aa)
Transmembrane transporter n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUY8_SACES
Putative integral membrane transporter {ECO:0000313|EMBL:AIY19716.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
A1-16-all-fractions_k255_686173_19
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20549..21190
-----------------
DNA (642bp)
protein (214aa)
Transcriptional regulator, GntR family n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3PTB4_MYCSJ
hypothetical protein
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AIY16240.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21281..22384)
-----------------
DNA (1104bp)
protein (368aa)
citrate synthase 2 (EC:2.3.3.1)
Citrate synthase (Si) {ECO:0000313|EMBL:AIY16242.1}; EC=2.3.3.1 {ECO:0000313|EMBL:AIY16242.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
citrate synthase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037E7B54
A1-16-all-fractions_k255_686173_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22507..23175
-----------------
DNA (669bp)
protein (223aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:0000255|HAMAP-Rule:MF_01629};; Pyridoxal 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01629}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B6228
hypothetical protein
A1-16-all-fractions_k255_686173_22
unknown

Not on your lists

comp(23127..24248)
-----------------
DNA (1122bp)
protein (374aa)

This feature has no annotations

A1-16-all-fractions_k255_686173_23
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24412..24975
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003645948
hypothetical protein
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY16251.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24975..26717
-----------------
DNA (1743bp)
protein (581aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036BE742
multidrug ABC transporter ATPase
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:AIY16252.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_25
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26714..28729
-----------------
DNA (2016bp)
protein (672aa)
ABC transporter related protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEM7_NOCSJ
multidrug ABC transporter ATP-binding protein
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:AIY16253.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_26
unknown

Not on your lists

comp(28837..29490)
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

A1-16-all-fractions_k255_686173_27
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29633..31261
-----------------
DNA (1629bp)
protein (543aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000360D085
Membrane transport protein {ECO:0000313|EMBL:AJR18133.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
major facilitator transporter
A1-16-all-fractions_k255_686173_28
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31258..31707
-----------------
DNA (450bp)
protein (150aa)
Putative MarR-family transcriptional regulator n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V160_9ACTO
Putative MarR-family transcriptional regulator {ECO:0000313|EMBL:EGD41099.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
regulatory protein MarR
A1-16-all-fractions_k255_686173_29
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31954..32397
-----------------
DNA (444bp)
protein (148aa)
Transcriptional regulator, MarR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SER4_NOCSJ
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AIY16257.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A1-16-all-fractions_k255_686173_30
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32401..33822)
-----------------
DNA (1422bp)
protein (474aa)
Acyltransferase, WS/DGAT/MGAT n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NS58_9BRAD
Acyltransferase, WS/DGAT/MGAT {ECO:0000313|EMBL:EKS31961.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acyltransferase, WS/DGAT/MGAT
Displaying items 1-30 of 114 in total

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