name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
A1-16-all-fractions_k255_686173_1
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1..240
----------------- DNA (240bp) protein (80aa) |
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Frankia sp. QA3 RepID=I9KIY4_9ACTO
|
|
A1-16-all-fractions_k255_686173_2
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
328..4158
----------------- DNA (3831bp) protein (1277aa) |
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003801430
DNA-directed RNA polymerase subunit beta'
|
|
A1-16-all-fractions_k255_686173_3
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4368..4676
----------------- DNA (309bp) protein (103aa) |
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
Pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MER2_BRAFD
transcriptional coactivator/pterin dehydratase
|
|
A1-16-all-fractions_k255_686173_4
unknown
|
Not on your lists |
4727..5044
----------------- DNA (318bp) protein (106aa) |
This feature has no annotations |
|
A1-16-all-fractions_k255_686173_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
5100..5624
----------------- DNA (525bp) protein (175aa) |
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80238.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
|
|
A1-16-all-fractions_k255_686173_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
5651..6913
----------------- DNA (1263bp) protein (421aa) |
Putative oxidoreductase {ECO:0000313|EMBL:AIY16222.1}; EC=1.-.-.- {ECO:0000313|EMBL:AIY16222.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Geranylgeranyl reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK4_NOCSJ
FAD-linked oxidoreductase
|
|
A1-16-all-fractions_k255_686173_7
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7093..7965
----------------- DNA (873bp) protein (291aa) |
NUDIX hydrolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK5_NOCSJ
NUDIX hydrolase
MutT-like domain protein {ECO:0000313|EMBL:AIY16223.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_8
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7983..9275
----------------- DNA (1293bp) protein (431aa) |
Alcohol dehydrogenase {ECO:0000313|EMBL:AIY16224.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AIY16224.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Iron-containing alcohol dehydrogenase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL4_NOCSJ
alcohol dehydrogenase
|
|
A1-16-all-fractions_k255_686173_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9272..11983
----------------- DNA (2712bp) protein (904aa) |
FAD linked oxidase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL5_NOCSJ
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABL80250.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
|
|
A1-16-all-fractions_k255_686173_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
12225..13424
----------------- DNA (1200bp) protein (400aa) |
Methyltransferase {ECO:0000313|EMBL:AIY16225.1}; EC=2.1.1.- {ECO:0000313|EMBL:AIY16225.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSK8_9ACTO
glutathione S-transferase
|
|
A1-16-all-fractions_k255_686173_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
13424..14371
----------------- DNA (948bp) protein (316aa) |
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL7_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:AJR18128.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
|
|
A1-16-all-fractions_k255_686173_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14562..15563
----------------- DNA (1002bp) protein (334aa) |
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEL8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80253.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
|
|
A1-16-all-fractions_k255_686173_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15571..15858
----------------- DNA (288bp) protein (96aa) |
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00030314F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY16227.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_14
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(16312..17196)
----------------- DNA (885bp) protein (295aa) |
hypothetical protein n=1 Tax=Curtobacterium sp. B18 RepID=UPI000345688E
hypothetical protein
Putative esterase {ECO:0000313|EMBL:AIY19663.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_15
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(17211..18329)
----------------- DNA (1119bp) protein (373aa) |
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:AIY16229.1}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:AIY16229.1};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Phosphoserine aminotransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XSK4_9ACTO
phosphoserine aminotransferase
|
|
A1-16-all-fractions_k255_686173_16
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
18433..18831
----------------- DNA (399bp) protein (133aa) |
Putative membrane protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U3E6_9PLAN
Putative membrane protein {ECO:0000313|EMBL:EMI55980.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
|
|
A1-16-all-fractions_k255_686173_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18803..19300
----------------- DNA (498bp) protein (166aa) |
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEM1_NOCSJ
acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIY16230.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_18
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(19297..20499)
----------------- DNA (1203bp) protein (401aa) |
Transmembrane transporter n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUY8_SACES
Putative integral membrane transporter {ECO:0000313|EMBL:AIY19716.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
|
|
A1-16-all-fractions_k255_686173_19
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20549..21190
----------------- DNA (642bp) protein (214aa) |
Transcriptional regulator, GntR family n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3PTB4_MYCSJ
hypothetical protein
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AIY16240.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(21281..22384)
----------------- DNA (1104bp) protein (368aa) |
citrate synthase 2 (EC:2.3.3.1)
Citrate synthase (Si) {ECO:0000313|EMBL:AIY16242.1}; EC=2.3.3.1 {ECO:0000313|EMBL:AIY16242.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
citrate synthase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037E7B54
|
|
A1-16-all-fractions_k255_686173_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
22507..23175
----------------- DNA (669bp) protein (223aa) |
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:0000255|HAMAP-Rule:MF_01629};; Pyridoxal 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01629}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B6228
hypothetical protein
|
|
A1-16-all-fractions_k255_686173_22
unknown
|
Not on your lists |
comp(23127..24248)
----------------- DNA (1122bp) protein (374aa) |
This feature has no annotations |
|
A1-16-all-fractions_k255_686173_23
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24412..24975
----------------- DNA (564bp) protein (188aa) |
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003645948
hypothetical protein
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY16251.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24975..26717
----------------- DNA (1743bp) protein (581aa) |
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036BE742
multidrug ABC transporter ATPase
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:AIY16252.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_25
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26714..28729
----------------- DNA (2016bp) protein (672aa) |
ABC transporter related protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEM7_NOCSJ
multidrug ABC transporter ATP-binding protein
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:AIY16253.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_26
unknown
|
Not on your lists |
comp(28837..29490)
----------------- DNA (654bp) protein (218aa) |
This feature has no annotations |
|
A1-16-all-fractions_k255_686173_27
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
29633..31261
----------------- DNA (1629bp) protein (543aa) |
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000360D085
Membrane transport protein {ECO:0000313|EMBL:AJR18133.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
major facilitator transporter
|
|
A1-16-all-fractions_k255_686173_28
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
31258..31707
----------------- DNA (450bp) protein (150aa) |
Putative MarR-family transcriptional regulator n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V160_9ACTO
Putative MarR-family transcriptional regulator {ECO:0000313|EMBL:EGD41099.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
regulatory protein MarR
|
|
A1-16-all-fractions_k255_686173_29
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
31954..32397
----------------- DNA (444bp) protein (148aa) |
Transcriptional regulator, MarR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SER4_NOCSJ
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AIY16257.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
|
|
A1-16-all-fractions_k255_686173_30
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32401..33822)
----------------- DNA (1422bp) protein (474aa) |
Acyltransferase, WS/DGAT/MGAT n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NS58_9BRAD
Acyltransferase, WS/DGAT/MGAT {ECO:0000313|EMBL:EKS31961.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acyltransferase, WS/DGAT/MGAT
|