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A1-16-all-fractions_k255_346678

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_346678_1
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..660)
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00038163C4
Uncharacterized protein {ECO:0000313|EMBL:EON33251.1}; TaxID=1316928 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae C-6.;"
hypothetical protein
A1-16-all-fractions_k255_346678_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(803..1627)
-----------------
DNA (825bp)
protein (275aa)
Ribonuclease BN (Fragment) n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNZ6_9ACTO
Ribonuclease BN {ECO:0000313|EMBL:EEP73232.1}; Flags: Fragment;; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
ribonuclease BN
A1-16-all-fractions_k255_346678_3
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1624..2166)
-----------------
DNA (543bp)
protein (181aa)
Putative 2',5' RNA ligase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HI73_ACTM4
Phosphoesterase {ECO:0000313|EMBL:KHD72659.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
putative 2',5' RNA ligase
A1-16-all-fractions_k255_346678_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2163..3182)
-----------------
DNA (1020bp)
protein (340aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
Tryptophan--tRNA ligase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4M0L4_9ACTO
trpS; tryptophanyl-tRNA synthetase
A1-16-all-fractions_k255_346678_5
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3195..3998)
-----------------
DNA (804bp)
protein (268aa)
CBS domain-containing protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWI9_9ACTO
CBS domain-containing protein {ECO:0000313|EMBL:EWM66063.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
CBS domain-containing protein
A1-16-all-fractions_k255_346678_6
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4196..4993
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003621645
DeoR family transcriptional regulator
Putative DeoR-family transcriptional regulator {ECO:0000313|EMBL:BAL85947.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
A1-16-all-fractions_k255_346678_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4990..6075
-----------------
DNA (1086bp)
protein (362aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TE03_MICAI
A1-16-all-fractions_k255_346678_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6072..7046
-----------------
DNA (975bp)
protein (325aa)
UDP-glucose 4-epimerase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T9V8_MICAI
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ADL44324.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
A1-16-all-fractions_k255_346678_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7030..8133
-----------------
DNA (1104bp)
protein (368aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Galactokinase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNZ1_9ACTO
galactokinase
A1-16-all-fractions_k255_346678_10
unknown

Not on your lists

comp(8140..8487)
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003644856
A1-16-all-fractions_k255_346678_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8526..9779)
-----------------
DNA (1254bp)
protein (418aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Sulfate adenylyltransferase large subunit n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F3A1_VERMA
sulfate adenylyltransferase large subunit
A1-16-all-fractions_k255_346678_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9782..10690)
-----------------
DNA (909bp)
protein (303aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F3A0_VERMA
A1-16-all-fractions_k255_346678_13
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10751..11533)
-----------------
DNA (783bp)
protein (261aa)
Inositol monophosphatase {ECO:0000313|EMBL:CCH15927.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCH15927.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000360F72E
inositol monophosphatase
A1-16-all-fractions_k255_346678_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11533..13098)
-----------------
DNA (1566bp)
protein (522aa)
UDP-phosphate galactose phosphotransferase n=1 Tax=Actinoplanes globisporus RepID=UPI00037C0DC5
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AGZ46195.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
A1-16-all-fractions_k255_346678_15
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13146..13730)
-----------------
DNA (585bp)
protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNY7_9ACTO
A1-16-all-fractions_k255_346678_16
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13731..14357)
-----------------
DNA (627bp)
protein (209aa)
50S ribosomal protein L25 n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNY6_9ACTO
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
A1-16-all-fractions_k255_346678_17
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14680..15663)
-----------------
DNA (984bp)
protein (328aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F396_VERMA
ribose-phosphate pyrophosphokinase
A1-16-all-fractions_k255_346678_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15694..17184)
-----------------
DNA (1491bp)
protein (497aa)
Bifunctional protein GlmU n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWH6_9ACTO
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
UDP-N-acetylglucosamine pyrophosphorylase
A1-16-all-fractions_k255_346678_19

Not on your lists

17208..18098
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000372F659
Putative esterase {ECO:0000313|EMBL:AHE14690.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
esterase
A1-16-all-fractions_k255_346678_20
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18076..18753)
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00038184A2
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65243.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
pentapeptide repeat-containing protein
A1-16-all-fractions_k255_346678_21
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19054..20004
-----------------
DNA (951bp)
protein (317aa)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:CCH15922.1}; EC=1.14.19.1 {ECO:0000313|EMBL:CCH15922.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Stearoyl-CoA 9-desaturase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWH5_9ACTO
stearoyl-CoA 9-desaturase
A1-16-all-fractions_k255_346678_22
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20040..20642
-----------------
DNA (603bp)
protein (201aa)
TetR family transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNY1_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:EEP73217.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
TetR family transcriptional regulator
A1-16-all-fractions_k255_346678_23
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20649..21143)
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q930_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD40639.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
A1-16-all-fractions_k255_346678_24
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21182..21628)
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q930_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD40639.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
A1-16-all-fractions_k255_346678_25
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21701..23485)
-----------------
DNA (1785bp)
protein (595aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Salinispora tropica RepID=UPI000362B060
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABP53261.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
A1-16-all-fractions_k255_346678_26
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23490..24437)
-----------------
DNA (948bp)
protein (316aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Salinispora pacifica RepID=UPI000376A507
A1-16-all-fractions_k255_346678_27
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(24430..25275)
-----------------
DNA (846bp)
protein (282aa)
ksgA; KsgA/Dim1 family 16S ribosomal RNA methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F387_VERMA
A1-16-all-fractions_k255_346678_28
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25272..26090)
-----------------
DNA (819bp)
protein (273aa)
Hydrolase, tatd family protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F386_VERMA
hydrolase, tatd family protein
Hydrolase, tatd family protein {ECO:0000313|EMBL:AEB42810.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
A1-16-all-fractions_k255_346678_29
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26220..26618
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWG6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH15913.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
Displaying 29 items

View Taxonomy