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A1-16-all-fractions_k255_4320499

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-16-all-fractions_k255_4320499_1
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..623)
DNA (621bp) protein (207aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FCA8_VERMA
A1-16-all-fractions_k255_4320499_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(704..1330)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAV2_9ACTO
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
30S ribosomal protein S4
A1-16-all-fractions_k255_4320499_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1332..1742)
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037B95A4
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
A1-16-all-fractions_k255_4320499_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1761..2141)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAV4_9ACTO
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
rpsM; 30S ribosomal protein S13
A1-16-all-fractions_k255_4320499_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2469..2690)
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=10 Tax=Micromonosporaceae RepID=IF1_SALAI
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
A1-16-all-fractions_k255_4320499_6
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2889..3734)
DNA (846bp) protein (282aa)
methionine aminopeptidase, type i (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Methionine aminopeptidase n=2 Tax=Micromonospora RepID=D9TF38_MICAI
A1-16-all-fractions_k255_4320499_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3736..4389)
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
adenylate kinase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000369AF4B
adenylate kinase
A1-16-all-fractions_k255_4320499_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4446..5771)
DNA (1326bp) protein (442aa)
Protein translocase subunit SecY n=2 Tax=Micromonospora RepID=D9TF40_MICAI
preprotein translocase, secy subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
A1-16-all-fractions_k255_4320499_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5977..6420)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Salinispora arenicola RepID=UPI00036766A8
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
A1-16-all-fractions_k255_4320499_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6420..6602)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00037792C8
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
A1-16-all-fractions_k255_4320499_11
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6608..7231)
DNA (624bp) protein (208aa)
30S ribosomal protein S5 n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000367B648
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
A1-16-all-fractions_k255_4320499_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7247..7594)
DNA (348bp) protein (116aa)
50S ribosomal protein L18 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FCC1_VERMA
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
rplR; 50S ribosomal protein L18
A1-16-all-fractions_k255_4320499_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7674..8216)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VU17_9ACTO
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
A1-16-all-fractions_k255_4320499_14
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8233..8640)
DNA (408bp) protein (136aa)
30S ribosomal protein S8 n=2 Tax=Micromonospora RepID=D9TF46_MICAI
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
A1-16-all-fractions_k255_4320499_15
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8699..8884)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LC60_9ACTO
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
rpsN; 30S ribosomal protein S14
A1-16-all-fractions_k255_4320499_16
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8886..9452)
DNA (567bp) protein (189aa)
50S ribosomal protein L5 n=1 Tax=Actinoplanes globisporus RepID=UPI00037DB708
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
A1-16-all-fractions_k255_4320499_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9452..9766)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Salinispora pacifica RepID=UPI000369643F
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
50S ribosomal protein L24
A1-16-all-fractions_k255_4320499_18
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9769..10137)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=6 Tax=Micromonosporaceae RepID=RL14_SALAI
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
A1-16-all-fractions_k255_4320499_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10191..10457)
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037E1A41
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A1-16-all-fractions_k255_4320499_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10454..10690)
DNA (237bp) protein (79aa)
50S ribosomal protein L29 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQH5_9ACTO
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
A1-16-all-fractions_k255_4320499_21
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10690..11115)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=1 Tax=Actinoplanes globisporus RepID=UPI000378EAF8
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
A1-16-all-fractions_k255_4320499_22
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11119..12000)
DNA (882bp) protein (294aa)
30S ribosomal protein S3 n=1 Tax=Salinispora RepID=UPI00035EE540
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
A1-16-all-fractions_k255_4320499_23
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12000..12554)
DNA (555bp) protein (185aa)
50S ribosomal protein L22 n=1 Tax=Catelliglobosispora koreensis RepID=UPI000372EC54
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
A1-16-all-fractions_k255_4320499_24
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12586..12867)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=3 Tax=Micromonospora RepID=D9TF56_MICAI
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
A1-16-all-fractions_k255_4320499_25
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12871..13350)
DNA (480bp) protein (160aa)
50S ribosomal protein L2 n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036E49DD
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
rplB; 50S ribosomal protein L2
Displaying 25 items

View Taxonomy