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A1-18-all-fractions_k255_632470

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_632470_1
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2..568)
DNA (567bp) protein (189aa)
Major facilitator transporter {ECO:0000313|EMBL:KIF34660.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
glucose/galactose transporter
Fucose permease id=3731159 bin=GWC2_Ignavibacteria_38_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
A1-18-all-fractions_k255_632470_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(614..2359)
DNA (1746bp) protein (582aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
DNA topoisomerase 1 n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLU9_GLOVI
topA; DNA topoisomerase I
A1-18-all-fractions_k255_632470_3
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2475..3236)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J6C1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ94820.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
membrane protein
A1-18-all-fractions_k255_632470_4
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3241..4110)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSLD10 RepID=G4WVW5_9BACT
hypothetical protein
Tax=RBG_16_Planctomycetes_64_10_curated
A1-18-all-fractions_k255_632470_5
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

4348..4854
DNA (507bp) protein (169aa)
id=2976040 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_632470_6
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(4869..5315)
DNA (447bp) protein (149aa)
id=3537356 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_632470_7
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5362..6123)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GPB2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDM84098.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
membrane protein
A1-18-all-fractions_k255_632470_8
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

6241..6906
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TIV1_CALNY
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADR18056.1}; Flags: Precursor;; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 /; Yu37-1).;"
A1-18-all-fractions_k255_632470_9
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6903..8312
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Burkholderia cepacia GG4 RepID=J7J933_BURCE
HAMP domain protein
A1-18-all-fractions_k255_632470_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8298..9314)
DNA (1017bp) protein (339aa)
50S rRNA methyltransferase {ECO:0000313|EMBL:GAO37450.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Probable RNA methyltransferase Tbd_1951 id=1372018 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative RNA methyltransferase
A1-18-all-fractions_k255_632470_11
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9486..9965
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JPL5_BURP8
Uncharacterized protein {ECO:0000313|EMBL:KHD87181.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
3-demethylubiquinone-9 3-methyltransferase
A1-18-all-fractions_k255_632470_12
Bacteriovorax sp. BAL6_X, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10005..11432)
DNA (1428bp) protein (476aa)
GHKL domain protein n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0CCA4_9DELT
GHKL domain protein {ECO:0000313|EMBL:EPZ50065.1}; TaxID=1201290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BAL6_X.;"
histidine kinase
A1-18-all-fractions_k255_632470_13
unknown

Not on your lists

comp(11510..11863)
DNA (354bp) protein (118aa)

This feature has no annotations

A1-18-all-fractions_k255_632470_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12070..13659)
DNA (1590bp) protein (530aa)
Sensor protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FRJ4_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE70812.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
sensor protein
A1-18-all-fractions_k255_632470_15
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13668..19253)
DNA (5586bp) protein (1862aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
diguanylate cyclase n=1 Tax=Chlorogloeopsis RepID=UPI00030ECB46
A1-18-all-fractions_k255_632470_16
Pseudozyma antarctica, Pseudozyma, Ustilaginales, Ustilaginomycetes, Basidiomycota, Fungi

Not on your lists

comp(19453..20031)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pseudozyma antarctica (strain T-34) RepID=M9LQX5_PSEA3
Uncharacterized protein {ECO:0000313|EMBL:GAC75136.1}; TaxID=1151754 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma.;" source="Pseudozyma antarctica (strain T-34) (Yeast) (Candida antarctica).;"
putative cell envelope integrity inner membrane protein TolA
A1-18-all-fractions_k255_632470_17
unknown

Not on your lists

comp(19988..20197)
DNA (210bp) protein (70aa)

This feature has no annotations

A1-18-all-fractions_k255_632470_18
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

20719..21702
DNA (984bp) protein (328aa)
Peptidase, M23/M37 family id=2976221 bin=GWA1_Deltaproteobacteria_52_35 species=Campylobacter lari genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
peptidase M23
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_632470_19
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(21711..22889)
DNA (1179bp) protein (393aa)
Multi-sensor signal transduction histidine kinase id=3297966 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
histidine kinase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_632470_20
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(22873..24384)
DNA (1512bp) protein (504aa)
Putative circadian clock protein, KaiC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJT9_9BACT
kaiC; putative circardian clock protein kinase KaiC
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_632470_21
unknown

Not on your lists

24769..24999
DNA (231bp) protein (77aa)

This feature has no annotations

A1-18-all-fractions_k255_632470_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24996..25367)
DNA (372bp) protein (124aa)
Chemotaxis protein CheY n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVB6_SORCE
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AGP35850.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
A1-18-all-fractions_k255_632470_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25526..26062
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036DA711
Ferritin-like protein, Dps type {ECO:0000313|EMBL:ENN84281.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / ferroxidase
A1-18-all-fractions_k255_632470_24
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(26149..26622)
DNA (474bp) protein (158aa)
Chemotaxis protein CheY n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP74_SORCE
chemotaxis protein CheY
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_632470_25
R_Bdellovibrionales_40_15, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(26782..28524)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V575_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bdellovibrionales_40_15_curated
A1-18-all-fractions_k255_632470_26
unknown

Not on your lists

28731..29507
DNA (777bp) protein (259aa)

This feature has no annotations

A1-18-all-fractions_k255_632470_27
unknown

Not on your lists

29507..31021
DNA (1515bp) protein (505aa)

This feature has no annotations

A1-18-all-fractions_k255_632470_28
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

31537..32265
DNA (729bp) protein (243aa)
Blue (Type 1) copper domain protein id=2881549 bin=GWA1_Deltaproteobacteria_52_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
cellulose-binding family II protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_632470_29
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32290..33846)
DNA (1557bp) protein (519aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Sensor histidine kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U1T4_MYXSD
sensor histidine kinase
A1-18-all-fractions_k255_632470_30
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(33916..35109)
DNA (1194bp) protein (398aa)
Major facilitator superfamily protein id=1697539 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacillus atrophaeus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
major facilitator superfamily protein
Tax=GWA2_Bdellovibrionales_49_15_curated
Displaying items 1-30 of 31 in total

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