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A1-18-all-fractions_k255_877146

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_877146_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transaldolase (EC:2.2.1.2)
phosoglucose isomerase n=1 Tax=Afipia birgiae RepID=UPI00030DCEF7
A1-18-all-fractions_k255_877146_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(267..800)
DNA (534bp) protein (178aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=planctomycete KSU-1 RepID=I3IHW8_9PLAN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
A1-18-all-fractions_k255_877146_3
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

959..2275
DNA (1317bp) protein (439aa)
Major facilitator transporter id=3059723 bin=GWF2_Ignavibacteria_35_20 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
mmlH; major facilitator family transporter
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
A1-18-all-fractions_k255_877146_4
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2263..3042)
DNA (780bp) protein (260aa)
OmpA/MotB domain protein id=2952445 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
flagellar basal body stator protein MotB
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A1-18-all-fractions_k255_877146_5
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3052..3840)
DNA (789bp) protein (263aa)
Flagellar motor protein MotA id=2952579 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
motA; flagellar motor protein MotA
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_877146_6
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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3882..5306
DNA (1425bp) protein (475aa)
id=3537200 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A1-18-all-fractions_k255_877146_7
unknown

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5375..6577
DNA (1203bp) protein (401aa)

This feature has no annotations

A1-18-all-fractions_k255_877146_8
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

7011..8798
DNA (1788bp) protein (596aa)
id=2952585 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_877146_9
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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8809..11022
DNA (2214bp) protein (738aa)
id=3537195 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_877146_10
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

11046..11996
DNA (951bp) protein (317aa)
rluA2; ribosomal large subunit pseudouridine synthase, RluA-like protein (EC:5.4.99.12)
RluA family pseudouridine synthase id=2952587 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_877146_11
Parcubacteria bacterium GW2011_GWF1_40_5, Parcubacteria, Bacteria

Not on your lists

12039..13028
DNA (990bp) protein (330aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR66949.1}; TaxID=1618955 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_5.;"
Putative uncharacterized protein id=3037868 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
A1-18-all-fractions_k255_877146_12
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(13025..13834)
DNA (810bp) protein (270aa)
Type IV fimbrial subunit id=3383742 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
fimbrial protein pilA
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_877146_13
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(13840..15354)
DNA (1515bp) protein (505aa)
Putative sporulation protein R id=3271156 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
SpoVR family protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_877146_14
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(15358..16470)
DNA (1113bp) protein (371aa)
Putative stress response protein id=3271255 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
putative stress response protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A1-18-all-fractions_k255_877146_15
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(16581..18686)
DNA (2106bp) protein (702aa)
Serine protein kinase (PrkA protein), P-loop containing id=3271257 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
serine protein kinase PrkA
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_877146_16
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

18981..19826
DNA (846bp) protein (282aa)
Protein serine/threonine phosphatase id=3415098 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
protein phosphatase
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_877146_17
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

19823..20968
DNA (1146bp) protein (382aa)
Cell wall-binding protein associated metalloendopeptidase id=3271261 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
zinc metalloendopeptidase
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_877146_18
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

21139..24105
DNA (2967bp) protein (989aa)
Protein translocase subunit SecA id=3271263 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
preprotein translocase subunit SecA
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_877146_19
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

24159..25151
DNA (993bp) protein (331aa)
id=3271264 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_877146_20
unknown

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comp(25183..25932)
DNA (750bp) protein (250aa)

This feature has no annotations

Displaying 20 items

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