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A1-18-all-fractions_k255_3803423

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3803423_1
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3..1103)
DNA (1101bp) protein (367aa)
Sigma-54 dependent DNA-binding response regulator id=3145103 bin=GWA1_Deltaproteobacteria_52_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
sigma-54 dependent DNA-binding response regulator
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_2
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(1107..3221)
DNA (2115bp) protein (705aa)
Flagellar sensor histidine kinase FleS id=3145097 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
signal transduction histidine kinase, nitrogen specific, NtrB
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_3803423_3
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

3284..3841
DNA (558bp) protein (186aa)
id=3298525 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A1-18-all-fractions_k255_3803423_4
unknown

Not on your lists

comp(3937..4524)
DNA (588bp) protein (196aa)

This feature has no annotations

A1-18-all-fractions_k255_3803423_5
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

4825..5658
DNA (834bp) protein (278aa)
Flagellin id=3308581 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
fliC1; putative flagellin FliC
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_6
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

5850..6581
DNA (732bp) protein (244aa)
tRNA (guanine-N(7)-)-methyltransferase id=3666769 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
trmB; tRNA (guanine-N(7)-)-methyltransferase
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_3803423_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(6604..6849)
DNA (246bp) protein (82aa)
CopG family protein n=4 Tax=Bacteria RepID=C8WIS3_EGGLE
CopG family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
A1-18-all-fractions_k255_3803423_8
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6806..7189)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8B0A0_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EON91994.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
toxin
A1-18-all-fractions_k255_3803423_9
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists

comp(7585..7986)
DNA (402bp) protein (134aa)
PF08818 domain protein n=2 Tax=Leptospira meyeri RepID=K5D132_LEPME
hypothetical protein
Tax=GWA2_RIF01_43_8_curated
A1-18-all-fractions_k255_3803423_10
Brucella melitensis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8036..8401)
DNA (366bp) protein (122aa)
putative lactoylglutathione lyase (EC:4.4.1.5)
Probable lactoylglutathione lyase {ECO:0000313|EMBL:AAL51346.1}; EC=4.4.1.5 {ECO:0000313|EMBL:AAL51346.1};; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094).;"
Glyoxalase/bleomycin resistance protein/dioxygenase n=129 Tax=Brucella RepID=D0B3F1_BRUME
A1-18-all-fractions_k255_3803423_11
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8428..9222)
DNA (795bp) protein (265aa)
short chain dehydrogenase (EC:1.1.1.100)
Short chain dehydrogenase {ECO:0000313|EMBL:CDM56030.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDM56030.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
short-chain dehydrogenase n=1 Tax=Enterobacter cloacae RepID=UPI0002ECEB53
A1-18-all-fractions_k255_3803423_12
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9408..10001
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1W4L6_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:KDN96178.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
TetR family transcriptional regulator
A1-18-all-fractions_k255_3803423_13
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10004..11113)
DNA (1110bp) protein (370aa)
Putrescine-binding periplasmic protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MN45_BDEBA
potD; hypothetical protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; Flags: Precursor;; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
A1-18-all-fractions_k255_3803423_14
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(11134..12492)
DNA (1359bp) protein (453aa)
Uncharacterized protein id=3666767 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_15
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12495..13103)
DNA (609bp) protein (203aa)
Putative lipoprotein id=3666766 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
membrane protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_3803423_16
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

13374..14372
DNA (999bp) protein (333aa)
Anion-transporting ATPase id=3666764 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
chromosome partitioning-like ATPase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_17
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

14369..15448
DNA (1080bp) protein (360aa)
Anion-transporting ATPase id=3308660 bin=GWA1_Deltaproteobacteria_52_35 species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
arsenate (2+)-transporting ATPase
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_3803423_18
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

15423..16490
DNA (1068bp) protein (356aa)
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_19
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

16487..17794
DNA (1308bp) protein (436aa)
Putative gamma-glutamylcysteine synthetase id=3308667 bin=GWA1_Deltaproteobacteria_52_35 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glutamate/cysteine ligase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_20
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(17864..18598)
DNA (735bp) protein (245aa)
HIT family hydrolases id=4691673 bin=GWA2__Bacteriovorax-rel_49_15 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
HIT family hydrolase
Tax=GWA2_Bdellovibrionales_49_15_curated
A1-18-all-fractions_k255_3803423_21
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(18595..19179)
DNA (585bp) protein (195aa)
Ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:EHC12808.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EHC12808.1};; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
acetyltransferase, ribosomal protein N-acetylase (EC:2.3.1.128)
Ribosomal-protein-alanine N-acetyltransferase n=1 Tax=Fischerella sp. JSC-11 RepID=G6FU78_9CYAN
A1-18-all-fractions_k255_3803423_22

Not on your lists

comp(19185..19484)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000361F860
Uncharacterized protein {ECO:0000313|EMBL:EKD70458.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
A1-18-all-fractions_k255_3803423_23
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(19517..20077)
DNA (561bp) protein (187aa)
Alkyl hydroperoxide reductase id=4845816 bin=PER_GWC2_41_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
peroxiredoxin
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
A1-18-all-fractions_k255_3803423_24
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

20109..20912
DNA (804bp) protein (268aa)
Phosphoesterase PA-phosphatase related id=3666760 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
phosphoesterase PA-phosphatase-like protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_25
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

20964..21461
DNA (498bp) protein (166aa)
Putative uncharacterized protein id=3308676 bin=GWA1_Deltaproteobacteria_52_35 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3803423_26
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

21488..23329
DNA (1842bp) protein (614aa)
Glycoside hydrolase 15-related protein id=3666758 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Natrinema versiforme genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
glycoside hydrolase 15-like protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_3803423_27
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23350..24537
DNA (1188bp) protein (396aa)
tetA; multidrug resistance protein id=109412 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
major facilitator transporter
Tax=GWA2_Deltaproteobacteria_45_12_curated
A1-18-all-fractions_k255_3803423_28
unknown

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comp(24556..25134)
DNA (579bp) protein (193aa)

This feature has no annotations

A1-18-all-fractions_k255_3803423_29
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25260..25595
DNA (336bp) protein (112aa)
beta-lactamase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002889D32
rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEM80072.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
A1-18-all-fractions_k255_3803423_30
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25705..26514)
DNA (810bp) protein (270aa)
Dihemic cytochrome c id=1250858 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Cytochrome c subfamily
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Displaying items 1-30 of 106 in total

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