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A1-18-all-fractions_k255_4253747

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4253747_1
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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2..208
DNA (207bp) protein (69aa)
DnaK suppressor protein n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JWL8_9BACT
dksA; DnaK suppressor protein
DnaK suppressor protein {ECO:0000313|EMBL:ACD83071.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
A1-18-all-fractions_k255_4253747_2
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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315..1616
DNA (1302bp) protein (434aa)
Major facilitator superfamily MFS_1 n=1 Tax=Fischerella sp. JSC-11 RepID=G6FQI0_9CYAN
nitrate/nitrite transporter
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
A1-18-all-fractions_k255_4253747_3
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

1622..2278
DNA (657bp) protein (219aa)
Putative membrane protein id=3457160 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4253747_4
unknown

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2342..2755
DNA (414bp) protein (138aa)

This feature has no annotations

A1-18-all-fractions_k255_4253747_5
unknown

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2737..4722
DNA (1986bp) protein (662aa)

This feature has no annotations

A1-18-all-fractions_k255_4253747_6
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

4816..5736
DNA (921bp) protein (307aa)
Peptidase, M48 domain protein n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0CEE2_9DELT
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4253747_7
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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comp(5816..6220)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z156_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ91239.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
hypothetical protein
A1-18-all-fractions_k255_4253747_8
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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6250..6759
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=3437184 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4253747_9
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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6845..7825
DNA (981bp) protein (327aa)
homospermidine synthase (EC:2.5.1.45)
Homospermidine synthase (Spermidine-specific) n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SR06_PLABD
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4253747_10
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7933..8181
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA1529 RepID=UPI0002D97A3F
Putative uncharacterized protein {ECO:0000313|EMBL:EFG08924.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
hypothetical protein
A1-18-all-fractions_k255_4253747_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(8178..9188)
DNA (1011bp) protein (337aa)
Putative universal stress protein id=3654419 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
putative universal stress protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
A1-18-all-fractions_k255_4253747_12
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9244..10554
DNA (1311bp) protein (437aa)
Chloride channel core n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y232_LEPCP
chloride channel core
Chloride channel core {ECO:0000313|EMBL:ACB34331.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A1-18-all-fractions_k255_4253747_13
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

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10541..11467
DNA (927bp) protein (309aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=15191433 bin=GWC1_OP11_49_16_COMPLETE species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
A1-18-all-fractions_k255_4253747_14
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

11521..13320
DNA (1800bp) protein (600aa)
Putative outer membrane protein id=3383830 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
outer membrane protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4253747_15
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

13317..15419
DNA (2103bp) protein (701aa)
Putative uncharacterized protein id=3316832 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4253747_16
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15425..16036)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7ZCF9_BDEBC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY03194.1}; TaxID=1069642 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus str. Tiberius.;"
A1-18-all-fractions_k255_4253747_17
unknown

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comp(16036..16350)
DNA (315bp) protein (105aa)

This feature has no annotations

A1-18-all-fractions_k255_4253747_18
unknown

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16810..17055
DNA (246bp) protein (82aa)

This feature has no annotations

A1-18-all-fractions_k255_4253747_19
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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17200..18615
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000378F0B8
Peptide ABC transporter {ECO:0000313|EMBL:KHD32912.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
putative permease
A1-18-all-fractions_k255_4253747_20
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18769..19227
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MJR5_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06706.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
A1-18-all-fractions_k255_4253747_21
CG_Bacteroid_01, Bacteroidetes, Bacteria

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19339..20568
DNA (1230bp) protein (410aa)
Major facilitator superfamily permease n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11T41_CYTH3
major facilitator superfamily permease
Tax=CG_Bacteroid_01
A1-18-all-fractions_k255_4253747_22
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20595..21482)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI00037CCCCA
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACT47377.1}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
A1-18-all-fractions_k255_4253747_23
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21637..22278
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V6W4_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH95117.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio exovorus JSS.;"
A1-18-all-fractions_k255_4253747_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22385..23746)
DNA (1362bp) protein (454aa)
aroH; 3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1K2_9PROT
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EWY41984.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
A1-18-all-fractions_k255_4253747_25
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23749..24039)
DNA (291bp) protein (97aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HQ37_9BACT
DAHP synthetase I/KDSA
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CDE40327.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
A1-18-all-fractions_k255_4253747_26
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24052..24918)
DNA (867bp) protein (289aa)
Prephenate dehydrogenase id=4390129 bin=GWF2_Bacteroidetes_49_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Prephenate and/or arogenate dehydrogenase (unknown specificity) 2
Tax=GWB2_Bacteroidetes_41_8_curated
A1-18-all-fractions_k255_4253747_27
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24915..26093)
DNA (1179bp) protein (393aa)
Class I and II aminotransferase n=1 Tax=Flavobacterium sp. F52 RepID=J1AGK0_9FLAO
Aminotransferase {ECO:0000313|EMBL:GAL82808.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
class I and II aminotransferase
A1-18-all-fractions_k255_4253747_28
Bacteroides sp. CAG:702, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26090..26632)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:702 RepID=R5TSM9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ68783.1}; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;"
prephenate dehydratase
Displaying 28 items

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