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A1-18-all-fractions_k255_4371844

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4371844_1
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

1..180
DNA (180bp) protein (60aa)
Predicted periplasmic solute-binding protein id=2818060 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
A1-18-all-fractions_k255_4371844_2
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

260..1573
DNA (1314bp) protein (438aa)
id=3462067 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4371844_3
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

1567..3936
DNA (2370bp) protein (790aa)
id=3793446 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4371844_4
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3870..5135)
DNA (1266bp) protein (422aa)
Uncharacterized protein id=2818064 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
putative glycosyltransferase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_5
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5156..5755)
DNA (600bp) protein (200aa)
ogt; methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
Methylated-DNA/protein-cysteine methyltransferase id=2818069 bin=GWA1_Deltaproteobacteria_52_35 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4371844_6
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

5873..6874
DNA (1002bp) protein (334aa)
MscS Mechanosensitive ion channel id=2297071 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
mechanosensitive ion channel MscS
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_7
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6920..8539
DNA (1620bp) protein (540aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI0003628772
histidine kinase
A1-18-all-fractions_k255_4371844_8
unknown

Not on your lists

8693..10318
DNA (1626bp) protein (542aa)

This feature has no annotations

A1-18-all-fractions_k255_4371844_9
unknown

Not on your lists

10467..10856
DNA (390bp) protein (130aa)

This feature has no annotations

A1-18-all-fractions_k255_4371844_10
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

11034..12875
DNA (1842bp) protein (614aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, gamma and tau subunits id=3853080 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4371844_11
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

12882..13532
DNA (651bp) protein (217aa)
Recombination protein RecR id=3383552 bin=GWA1_Deltaproteobacteria_52_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
recombination protein RecR
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4371844_12
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

13529..14110
DNA (582bp) protein (194aa)
GTPase-like protein id=3853076 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
GTPase-like protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_13
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

14194..14604
DNA (411bp) protein (137aa)
Transcriptional regulator, TraR/DksA family id=3853074 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
dksA; putative RNA polymerase-binding protein DksA
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4371844_14
unknown

Not on your lists

14997..15146
DNA (150bp) protein (50aa)

This feature has no annotations

A1-18-all-fractions_k255_4371844_15
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

15329..15733
DNA (405bp) protein (135aa)
Transcriptional regulator, TraR/DksA family id=3383562 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
TraR/DksA family transcriptional regulator
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_16
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(16121..17557)
DNA (1437bp) protein (479aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin id=3853072 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
protease
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4371844_17
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(17926..19458)
DNA (1533bp) protein (511aa)
Cell division protein FtsZ id=3853071 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
cell division protein FtsZ
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4371844_18
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19566..20834)
DNA (1269bp) protein (423aa)
Cell division protein ftsA id=3853070 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
cell division protein FtsA
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_19
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(20895..21674)
DNA (780bp) protein (260aa)
Cell division protein id=3383577 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
cell division protein FtsQ
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_20
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

21761..23146
DNA (1386bp) protein (462aa)
processing peptidase (EC:3.4.24.64)
Processing peptidase id=3853068 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_21
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

23158..24510
DNA (1353bp) protein (451aa)
Putative uncharacterized protein id=3853067 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_22
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(24569..25510)
DNA (942bp) protein (314aa)
UDP-N-acetylmuramate dehydrogenase id=3068026 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_23
Vibrio owensii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25519..26553)
DNA (1035bp) protein (345aa)
NADH:flavin oxidoreductase n=1 Tax=Vibrio owensii RepID=UPI000363DBA9
NADH:flavin oxidoreductase {ECO:0000313|EMBL:KIF51866.1}; TaxID=1229493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio owensii CAIM 1854 = LMG 25443.;"
NADH:flavin oxidoreductase
A1-18-all-fractions_k255_4371844_24
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(26635..28044)
DNA (1410bp) protein (470aa)
UDP-N-acetylmuramate--L-alanine ligase id=3536745 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
murC; UDP-N-acetylmuramate--L-alanine ligase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_25
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(28100..29203)
DNA (1104bp) protein (368aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=3068024 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4371844_26
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(29200..30405)
DNA (1206bp) protein (402aa)
Lipid II flippase FtsW id=3536747 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
cell division protein FtsW
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4371844_27
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(30428..31813)
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=3536748 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4371844_28
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(31834..32910)
DNA (1077bp) protein (359aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=3536749 bin=GWA1_Deltaproteobacteria_52_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4371844_29
unknown

Not on your lists

33064..34605
DNA (1542bp) protein (514aa)

This feature has no annotations

A1-18-all-fractions_k255_4371844_30
unknown

Not on your lists

34635..36188
DNA (1554bp) protein (518aa)

This feature has no annotations

Displaying items 1-30 of 67 in total

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