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A1-18-all-fractions_k255_4400477

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4400477_1
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(254..919)
DNA (666bp) protein (222aa)
HAD hydrolase, family IA, variant 1 id=4078071 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
haloacid dehalogenase
Tax=GWA2_Bdellovibrionales_49_15_curated
A1-18-all-fractions_k255_4400477_2
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1548..2891
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. KO116.;"
Probable two-component sensor n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6VCI1_PSEA7
integral membrane sensor signal transduction histidine kinase
A1-18-all-fractions_k255_4400477_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2904..4169)
DNA (1266bp) protein (422aa)
Pyruvate/Phosphoenolpyruvate kinase domain protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NX3_STIAD
Phosphoenolpyruvate kinase {ECO:0000313|EMBL:KFA89440.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
pyruvate/phosphoenolpyruvate kinase domain-containing protein
A1-18-all-fractions_k255_4400477_4
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(4166..5854)
DNA (1689bp) protein (563aa)
ade; adenine deaminase (EC:3.5.4.2)
Adenine deaminase id=4007585 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4400477_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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comp(5876..7015)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1R3_METPS
hypothetical protein
Tax=RBG_16_Zixibacteria_50_21_curated
A1-18-all-fractions_k255_4400477_6
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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7059..7721
DNA (663bp) protein (221aa)
Uncharacterized protein id=3659548 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4400477_7
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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7864..8883
DNA (1020bp) protein (340aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein id=3880880 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
pstS; phosphate ABC transporter substrate-binding protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4400477_8
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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8902..9870
DNA (969bp) protein (323aa)
Phosphate transport system permease protein PstC id=3880882 bin=GWB1_Deltaproteobacteria_rel_55_8 species=uncultured bacterium F25-01 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
phosphate ABC transporter permease
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4400477_9
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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9867..10742
DNA (876bp) protein (292aa)
Phosphate ABC transporter, permease protein PstA id=3880884 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
pstA; phosphate transport system permease protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4400477_10
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

10746..11507
DNA (762bp) protein (254aa)
Phosphate import ATP-binding protein id=3269508 bin=GWA1_Deltaproteobacteria_52_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
pstB; phosphate import ATP-binding protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4400477_11
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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11523..12209
DNA (687bp) protein (229aa)
Transcriptional repressor for high-affinity phosphate uptake (Modular protein) id=4555834 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
phosphate transport system regulatory protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4400477_12
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

12209..12898
DNA (690bp) protein (230aa)
DNA-binding response regulator PhoB id=5008626 bin=GWA2__Bacteriovorax-rel_49_15 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
phoB; DNA-binding response regulator PhoB
Tax=GWA2_Bdellovibrionales_49_15_curated
A1-18-all-fractions_k255_4400477_13
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12885..14741)
DNA (1857bp) protein (619aa)
ABC transporter ATP-binding protein id=3196363 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter ATP-binding protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4400477_14
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14744..15778)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P8F9_9DELT
Fatty acid desaturase {ECO:0000313|EMBL:KFA91956.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
putative hydroxylase
A1-18-all-fractions_k255_4400477_15
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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16011..16754
DNA (744bp) protein (248aa)
Pectinesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXX1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
A1-18-all-fractions_k255_4400477_16
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(16767..17789)
DNA (1023bp) protein (341aa)
ispB; putative octaprenyl-diphosphate synthase (EC:2.5.1.-)
Putative octaprenyl-diphosphate synthase id=3889993 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
A1-18-all-fractions_k255_4400477_17
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

18022..19569
DNA (1548bp) protein (516aa)
aceB; malate synthase (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Malate synthase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYF0_THERP
A1-18-all-fractions_k255_4400477_18
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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19620..20912
DNA (1293bp) protein (431aa)
Isocitrate lyase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NS53_ROSCS
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:ABU60399.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
A1-18-all-fractions_k255_4400477_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21162..22187
DNA (1026bp) protein (342aa)
Esterase, PHB depolymerase family n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJK5_STRM5
PHB depolymerase family esterase
Esterase, PHB depolymerase family {ECO:0000313|EMBL:ACF51760.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
A1-18-all-fractions_k255_4400477_20
unknown

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comp(22215..22853)
DNA (639bp) protein (213aa)

This feature has no annotations

A1-18-all-fractions_k255_4400477_21
unknown

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comp(22900..23469)
DNA (570bp) protein (190aa)

This feature has no annotations

A1-18-all-fractions_k255_4400477_22
unknown

Not on your lists

comp(23693..24397)
DNA (705bp) protein (235aa)

This feature has no annotations

A1-18-all-fractions_k255_4400477_23
unknown

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comp(24417..24725)
DNA (309bp) protein (103aa)

This feature has no annotations

A1-18-all-fractions_k255_4400477_24
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(24794..27358)
DNA (2565bp) protein (855aa)
Uncharacterized protein id=3438443 bin=GWA1_Deltaproteobacteria_52_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
A1-18-all-fractions_k255_4400477_25
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27358..28296)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MJ73_BDEBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE80688.1}; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
A1-18-all-fractions_k255_4400477_26
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

28443..30761
DNA (2319bp) protein (773aa)
Peptidase S45 penicillin amidase id=3263975 bin=GWA1_Deltaproteobacteria_52_35 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
peptidase S45 penicillin amidase
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4400477_27
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30772..33324)
DNA (2553bp) protein (851aa)
ABC transporter permease n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289CA53
ABC transporter permease {ECO:0000313|EMBL:KHD89020.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
ABC transporter permease
Displaying 27 items

View Taxonomy