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A1-18-all-fractions_k255_4479413

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4479413_1
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3..662)
DNA (660bp) protein (220aa)
GTPase Era id=3178723 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
GTPase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_2
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(680..1372)
DNA (693bp) protein (231aa)
Ribonuclease 3 id=3178720 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
rnc; ribonuclease III
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
A1-18-all-fractions_k255_4479413_3
unknown

Not on your lists

comp(1591..1860)
DNA (270bp) protein (90aa)

This feature has no annotations

A1-18-all-fractions_k255_4479413_4
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2205..3689)
DNA (1485bp) protein (495aa)
RNA modification enzyme, MiaB family id=2677155 bin=GWA1_Deltaproteobacteria_52_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Fe-S oxidoreductase
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4479413_5
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3668..4804)
DNA (1137bp) protein (379aa)
tRNA-specific 2-thiouridylase MnmA id=3178713 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
mnmA; tRNA-specific 2-thiouridylase MnmA
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4479413_6
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(4823..5995)
DNA (1173bp) protein (391aa)
iscS2; IscS2 (EC:2.8.1.7)
Cysteine desulfurase id=2677162 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_4479413_7
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5967..6482)
DNA (516bp) protein (172aa)
Putative DNA-binding protein id=3178615 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
putative DNA-binding protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A1-18-all-fractions_k255_4479413_8
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

6649..7386
DNA (738bp) protein (246aa)
id=2677169 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_9
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(7352..7729)
DNA (378bp) protein (126aa)
Uncharacterized protein id=3178611 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Methylocystis taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_10
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(7806..9473)
DNA (1668bp) protein (556aa)
Putative YjeF-related sugar kinase id=2677174 bin=GWA1_Deltaproteobacteria_52_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
putative YjeF-related sugar kinase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_11
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(9506..10276)
DNA (771bp) protein (257aa)
Pyridoxine 5'-phosphate synthase id=3178609 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
pdxJ; pyridoxine 5'-phosphate synthase
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4479413_12
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(10304..11713)
DNA (1410bp) protein (470aa)
Phosphoglucosamine mutase id=3178608 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
glmM; phosphoglucosamine mutase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_13
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(11744..12667)
DNA (924bp) protein (308aa)
YbbR-like id=2677256 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_14
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12671..13540)
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=2677259 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
membrane protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_15
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(13603..15546)
DNA (1944bp) protein (648aa)
FtsH peptidase (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH id=3178605 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4479413_16
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(15625..16584)
DNA (960bp) protein (320aa)
tRNA(Ile)-lysidine synthase id=3178604 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
tRNA(Ile)-lysidine synthetase
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_4479413_17
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

comp(16600..18483)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GYB3_ACACA
Uncharacterized protein {ECO:0000313|EMBL:ELR17985.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
A1-18-all-fractions_k255_4479413_18
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18903..19604
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LQU3_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK51803.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
A1-18-all-fractions_k255_4479413_19
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19620..20396)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MIQ8_BDEBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE80855.1}; Flags: Precursor;; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
A1-18-all-fractions_k255_4479413_20
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(20485..21417)
DNA (933bp) protein (311aa)
Putative uncharacterized protein id=3880982 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_4479413_21
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21571..23004)
DNA (1434bp) protein (478aa)
oxidoreductase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0003043228
Oxidoreductase {ECO:0000313|EMBL:KJK21420.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
Displaying 21 items

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