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A1-18-all-fractions_k255_1282340

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1282340_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(380..1954)
DNA (1575bp) protein (525aa)
histidine kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A060
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO38766.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
histidine kinase
A1-18-all-fractions_k255_1282340_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2115..3368)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037D4254
Uncharacterized protein {ECO:0000313|EMBL:GAO38768.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_1282340_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3645..6476
DNA (2832bp) protein (944aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000376EBF0
A1-18-all-fractions_k255_1282340_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6625..7107
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037C23E9
Required for attachment to host cells family protein {ECO:0000313|EMBL:KGB57376.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
A1-18-all-fractions_k255_1282340_5
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7160..7747)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000302347D
Uncharacterized protein {ECO:0000313|EMBL:KHL26627.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
A1-18-all-fractions_k255_1282340_6
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7831..8262)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA7B5
Uncharacterized protein {ECO:0000313|EMBL:AHE54775.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
A1-18-all-fractions_k255_1282340_7
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8267..9112)
DNA (846bp) protein (282aa)
glycoside hydrolase n=1 Tax=Sphingomonas RepID=UPI0002883987
Glycoside hydrolase {ECO:0000313|EMBL:KHA63082.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
glycoside hydrolase
A1-18-all-fractions_k255_1282340_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9154..10485
DNA (1332bp) protein (444aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
tRNA (uracil-5-)-methyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI000377B1D3
tRNA (uracil-5-)-methyltransferase
A1-18-all-fractions_k255_1282340_9
unknown

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10736..10933
DNA (198bp) protein (66aa)

This feature has no annotations

A1-18-all-fractions_k255_1282340_10
unknown

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10994..11197
DNA (204bp) protein (68aa)

This feature has no annotations

A1-18-all-fractions_k255_1282340_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11184..12617)
DNA (1434bp) protein (478aa)
pyruvate dehydrogenase subunit beta (EC:1.2.4.1)
Transketolase, central region n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5M4_SPHWW
Transketolase, central region {ECO:0000313|EMBL:ABQ67590.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_1282340_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12617..13669)
DNA (1053bp) protein (351aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5W6_9SPHN
pyruvate dehydrogenase (acetyl-transferring)
A1-18-all-fractions_k255_1282340_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13747..14061)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037A84D9
Putative cell division protein {ECO:0000313|EMBL:GAO38630.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
septum formation initiator
A1-18-all-fractions_k255_1282340_14
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14143..15432)
DNA (1290bp) protein (430aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Sphingomonas sp. S17 RepID=F3WT32_9SPHN
A1-18-all-fractions_k255_1282340_15
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15579..16205
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00038109C7
Uncharacterized protein {ECO:0000313|EMBL:KKC25878.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
A1-18-all-fractions_k255_1282340_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16205..16549
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD56E
Uncharacterized protein {ECO:0000313|EMBL:GAO38635.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_1282340_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16549..16896
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5W1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50333.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1282340_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16893..17306
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5BFB8
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28753.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_1282340_19
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17340..17582
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A414
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO38638.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A1-18-all-fractions_k255_1282340_20
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17637..19418
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2SC98_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KHL25126.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
A1-18-all-fractions_k255_1282340_21
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19403..20032)
DNA (630bp) protein (210aa)
Rhomboid family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3E2_SPHWW
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ABQ66808.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_1282340_22
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20038..20517)
DNA (480bp) protein (160aa)
transcription elongation factor GreA n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003667798
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
greA; transcription elongation factor GreA
A1-18-all-fractions_k255_1282340_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20596..21588)
DNA (993bp) protein (331aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
carbamoyl phosphate synthase large subunit n=1 Tax=Sphingomonas elodea RepID=UPI00026316EF
carbamoyl phosphate synthase large subunit
Displaying 23 items

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