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A1-18-all-fractions_k255_1705796

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1705796_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2713
DNA (2712bp) protein (904aa)
peptidase M16 n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E30B
Zn-dependent peptidase
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:ABC62376.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
A1-18-all-fractions_k255_1705796_2
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2734..3135)
DNA (402bp) protein (134aa)
glyoxalase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC1F
Glyoxalase {ECO:0000313|EMBL:KKC26498.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
glyoxalase family protein
A1-18-all-fractions_k255_1705796_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3247..3516
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQT7_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAD47739.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
A1-18-all-fractions_k255_1705796_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3517..4575)
DNA (1059bp) protein (353aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B54942
A1-18-all-fractions_k255_1705796_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4572..5054)
DNA (483bp) protein (161aa)
purE; N5-carboxyaminoimidazole ribonucleotide mutase (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1S4_9SPHN
A1-18-all-fractions_k255_1705796_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5234..5821
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00035DF383
Uncharacterized protein {ECO:0000313|EMBL:GAO39766.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
diguanylate cyclase
A1-18-all-fractions_k255_1705796_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5818..6504)
DNA (687bp) protein (229aa)
gpm; phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z3E8_SPHJU
A1-18-all-fractions_k255_1705796_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6504..7676)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HCD9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97049.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative carboxypeptidase
A1-18-all-fractions_k255_1705796_9
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7778..8365
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MHH8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET93045.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
A1-18-all-fractions_k255_1705796_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8423..11608
DNA (3186bp) protein (1062aa)
UPI0003D0625E related cluster n=1 Tax=unknown RepID=UPI0003D0625E
Uncharacterized protein {ECO:0000313|EMBL:GAO37881.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
glycosyl hydrolase
A1-18-all-fractions_k255_1705796_11
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11794..12801
DNA (1008bp) protein (336aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-galactose 4-epimerase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5C3_9SPHN
UDP-galactose 4-epimerase {ECO:0000313|EMBL:EGD60301.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
A1-18-all-fractions_k255_1705796_12
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12798..13772)
DNA (975bp) protein (325aa)
Ion channel n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUS7_9BRAD
Ion channel {ECO:0000313|EMBL:EIG63533.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
A1-18-all-fractions_k255_1705796_13
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13982..14107
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCP4_9SPHN
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
50S ribosomal protein L36
A1-18-all-fractions_k255_1705796_14
unknown

Not on your lists

14344..14640
DNA (297bp) protein (99aa)

This feature has no annotations

A1-18-all-fractions_k255_1705796_15
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14647..15051)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Zymomonas mobilis subsp. mobilis ATCC 29191 RepID=I6XMK3_ZYMMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV90582.1}; Flags: Precursor;; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).;"
A1-18-all-fractions_k255_1705796_16
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15063..16235)
DNA (1173bp) protein (391aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Sphingobium baderi LL03 RepID=T0GWY3_9SPHN
purT; phosphoribosylglycinamide formyltransferase 2
A1-18-all-fractions_k255_1705796_17
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16295..17176
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003658651
Uncharacterized protein {ECO:0000313|EMBL:EKU75894.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
A1-18-all-fractions_k255_1705796_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17181..17423)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489FD9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71518.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_1705796_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17543..17869)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SGK5_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49732.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1705796_20
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(17884..18189)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY14573.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
A1-18-all-fractions_k255_1705796_21
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18359..19846
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKV9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK92436.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
A1-18-all-fractions_k255_1705796_22
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19977..20165
DNA (189bp) protein (63aa)
Aquaporin Z n=1 Tax=Photobacterium profundum RepID=Q6LSM0_PHOPR
aquaporin Z
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=314280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum 3TCK.;"
Displaying 22 items

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