ggKbase home page

A1-18-all-fractions_k255_1747672

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1747672_1

Not on your lists

comp(1..474)
DNA (474bp) protein (158aa)
Glycosyl hydrolase, BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1AQH5_9ZZZZ
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:EQD59592.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Cellulase
A1-18-all-fractions_k255_1747672_2

Not on your lists

614..1447
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pTW2 RepID=B8PZV0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ACA34408.1}; TaxID=504464 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW2.;"
transcriptional regulator
A1-18-all-fractions_k255_1747672_3
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1486..2166
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA99_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49154.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
A1-18-all-fractions_k255_1747672_4
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2159..3181)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAA0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49155.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
A1-18-all-fractions_k255_1747672_5
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3191..4270)
DNA (1080bp) protein (360aa)
Metallophosphoesterase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAA1_9SPHN
Metallophosphoesterase {ECO:0000313|EMBL:EDL49156.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
metallophosphoesterase
A1-18-all-fractions_k255_1747672_6
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4423..5184
DNA (762bp) protein (254aa)
FIG005935: membrane protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MRG7_9SPHN
putative integral membrane protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
A1-18-all-fractions_k255_1747672_7
unknown

Not on your lists

comp(5554..5811)
DNA (258bp) protein (86aa)

This feature has no annotations

A1-18-all-fractions_k255_1747672_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5961..7088
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6D692
Aspartyl beta-hydroxylase {ECO:0000313|EMBL:KKC25509.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
aspartyl/asparaginyl beta-hydroxylase
A1-18-all-fractions_k255_1747672_9
unknown

Not on your lists

comp(7051..7581)
DNA (531bp) protein (177aa)

This feature has no annotations

A1-18-all-fractions_k255_1747672_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7697..8332)
DNA (636bp) protein (212aa)
Glutathione S-transferase {ECO:0000313|EMBL:BAK67981.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAK67981.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
glutathione S-transferase n=1 Tax=Sphingomonas elodea RepID=UPI0002631E59
glutathione S-transferase
A1-18-all-fractions_k255_1747672_11
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..8822)
DNA (453bp) protein (151aa)
Competence protein CinA n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GHY0_9SPHN
Competence protein CinA {ECO:0000313|EMBL:EPR17310.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
cinA; competence/damage-inducible protein CinA C-terminal domain
A1-18-all-fractions_k255_1747672_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8879..10579)
DNA (1701bp) protein (567aa)
peptidase M20 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3E274
Peptidase M28 family protein {ECO:0000313|EMBL:GAO39368.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative aminopeptidase
A1-18-all-fractions_k255_1747672_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10657..12819)
DNA (2163bp) protein (721aa)
Putative S9 family peptidase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SC38_9SPHN
putative S9 family peptidase
Putative S9 family peptidase {ECO:0000313|EMBL:AGH48237.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1747672_14
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12884..13225
DNA (342bp) protein (114aa)
Putative transcriptional regulator n=1 Tax=Burkholderia sp. BT03 RepID=J2QFD8_9BURK
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EUC16308.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
ArsR family transcriptional regulator
A1-18-all-fractions_k255_1747672_15
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13218..13766
DNA (549bp) protein (183aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FSD8_RHIML
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EHK79868.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
A1-18-all-fractions_k255_1747672_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13880..16210)
DNA (2331bp) protein (777aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2I6_9SPHN
ATP-dependent Clp protease ATP-binding subunit ClpA
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:AGH48704.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1747672_17
unknown

Not on your lists

16394..16579
DNA (186bp) protein (62aa)

This feature has no annotations

A1-18-all-fractions_k255_1747672_18
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16626..17597
DNA (972bp) protein (324aa)
NAD(P)H quinone oxidoreductase n=1 Tax=Sphingomonas melonis RepID=UPI000371515F
Putative dehydrogenase/reductase {ECO:0000313|EMBL:GAO40376.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
NAD(P)H-quinone oxidoreductase
A1-18-all-fractions_k255_1747672_19
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17610..18230
DNA (621bp) protein (207aa)
Glutathione S-transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INJ7_9SPHN
Glutathione S-transferase {ECO:0000313|EMBL:KGB52121.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
gst; glutathione S-transferase
A1-18-all-fractions_k255_1747672_20
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18341..19045
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V277_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:GAO39147.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_1747672_21
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

19090..19338
DNA (249bp) protein (83aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease 7 small subunit; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
exodeoxyribonuclease VII small subunit n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B48B8A
exodeoxyribonuclease VII, small subunit
A1-18-all-fractions_k255_1747672_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19295..20242
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003797537
Polyprenyl synthetase {ECO:0000313|EMBL:ENY83104.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
polyprenyl synthetase
A1-18-all-fractions_k255_1747672_23
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20258..20749
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
phosphopantetheine adenylyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI0003721EBA
phosphopantetheine adenylyltransferase
A1-18-all-fractions_k255_1747672_24
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20798..21367
DNA (570bp) protein (190aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E6T2_9SPHN
peptidylprolyl isomerase
A1-18-all-fractions_k255_1747672_25
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21378..22430
DNA (1053bp) protein (351aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=QUEA_SPHWW
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
A1-18-all-fractions_k255_1747672_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22573..23601
DNA (1029bp) protein (343aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
queuine tRNA-ribosyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630FEB
queuine tRNA-ribosyltransferase
A1-18-all-fractions_k255_1747672_27
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23662..24189
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000303053C
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12305.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
A1-18-all-fractions_k255_1747672_28
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24190..25095)
DNA (906bp) protein (302aa)
Glutathione S-transferase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J1K6_9SPHN
S-transferase {ECO:0000313|EMBL:KGM34339.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Glutathione S-transferase
A1-18-all-fractions_k255_1747672_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25166..26491)
DNA (1326bp) protein (442aa)
DEAD/DEAH box helicase-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUA4_SPHAL
Putative helicase {ECO:0000313|EMBL:GAO37979.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
DEAD/DEAH box helicase
A1-18-all-fractions_k255_1747672_30
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26624..27058)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S829_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH51093.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Displaying items 1-30 of 35 in total

View Taxonomy