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A1-18-all-fractions_k255_2537046

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_2537046_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..357
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG50_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
A1-18-all-fractions_k255_2537046_2
unknown

Not on your lists

649..870
DNA (222bp) protein (74aa)

This feature has no annotations

A1-18-all-fractions_k255_2537046_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(872..1783)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0L6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49535.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2537046_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1888..2595
DNA (708bp) protein (236aa)
cell division protein FtsE n=1 Tax=Sphingomonas melonis RepID=UPI00036133E2
ABC transporter
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_2537046_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2595..3464
DNA (870bp) protein (290aa)
cell division protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A76F
Putative cell division protein {ECO:0000313|EMBL:GAO40202.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
cell division protein
A1-18-all-fractions_k255_2537046_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3461..3997
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SJ69_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50632.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2537046_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3994..4698
DNA (705bp) protein (235aa)
glycerol acyltransferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B73EF8
Uncharacterized protein {ECO:0000313|EMBL:AHE53196.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
phospholipid/glycerol acyltransferase
A1-18-all-fractions_k255_2537046_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4675..7029)
DNA (2355bp) protein (785aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S567_9SPHN
A1-18-all-fractions_k255_2537046_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7026..8093)
DNA (1068bp) protein (356aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00281};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00281};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Sphingomonas wittichii RepID=UPI0002E22E99
A1-18-all-fractions_k255_2537046_10
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(8135..9550)
DNA (1416bp) protein (472aa)
Predicted transcriptional regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAM0_PHEZH
DNA-binding protein {ECO:0000313|EMBL:KIY12813.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
transcriptional regulator
A1-18-all-fractions_k255_2537046_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9678..10955
DNA (1278bp) protein (426aa)
Isocitrate lyase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SBW1_9SPHN
Isocitrate lyase {ECO:0000313|EMBL:GAO40370.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
isocitrate lyase
A1-18-all-fractions_k255_2537046_12
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10967..11164
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H424_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV31819.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
hypothetical protein
A1-18-all-fractions_k255_2537046_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11161..12741
DNA (1581bp) protein (527aa)
malate synthase (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
PREDICTED: malate synthase, glyoxysomal-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12CB4
A1-18-all-fractions_k255_2537046_14
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12762..13373)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FK54_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KFF16281.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
A1-18-all-fractions_k255_2537046_15
unknown

Not on your lists

comp(13476..13676)
DNA (201bp) protein (67aa)

This feature has no annotations

A1-18-all-fractions_k255_2537046_16
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13908..14276)
DNA (369bp) protein (123aa)
50S ribosomal protein L20 n=1 Tax=Sphingobium xenophagum RepID=UPI00030141A0
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
rplT; 50S ribosomal protein L20
A1-18-all-fractions_k255_2537046_17
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14289..14492)
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Sphingomonas sp. S17 RepID=F3X268_9SPHN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
rpmI; 50S ribosomal protein L35
A1-18-all-fractions_k255_2537046_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14623..15279)
DNA (657bp) protein (219aa)
short-chain dehydrogenase/reductase sDR (EC:1.1.1.184)
Short-chain dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JIN4_9PROT
Short-chain dehydrogenase {ECO:0000313|EMBL:EKE75103.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
A1-18-all-fractions_k255_2537046_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15313..16248)
DNA (936bp) protein (312aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SG86_9SPHN
A1-18-all-fractions_k255_2537046_20
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16343..18019
DNA (1677bp) protein (559aa)
Putative glutamine-dependent NAD(+) synthetase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ7_9SPHN
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:GAO40642.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
nadE; putative glutamine-dependent NAD(+) synthetase
A1-18-all-fractions_k255_2537046_21
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18016..19335
DNA (1320bp) protein (440aa)
glutamyl-tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0U1_9SPHN
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
A1-18-all-fractions_k255_2537046_22
unknown

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19440..19700
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000370DEBE
A1-18-all-fractions_k255_2537046_23
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

19721..20677
DNA (957bp) protein (319aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V936_SPHWW
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:KIY13952.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
A1-18-all-fractions_k255_2537046_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20687..21295
DNA (609bp) protein (203aa)
riboflavin synthase subunit alpha n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B7B788
riboflavin synthase subunit alpha
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AJP73554.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_2537046_25
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21351..22634
DNA (1284bp) protein (428aa)
UPI0003CFB04B related cluster n=1 Tax=unknown RepID=UPI0003CFB04B
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:ESZ86449.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
A1-18-all-fractions_k255_2537046_26
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22638..22961
DNA (324bp) protein (108aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2F3_9SPHN
ribH; 6,7-dimethyl-8-ribityllumazine synthase
Displaying 26 items

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