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A1-18-all-fractions_k255_2906897

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_2906897_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..837)
DNA (837bp) protein (279aa)
zinc-dependent alcohol dehydrogenase oxidoreductase (EC:1.1.1.-)
IMP dehydrogenase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AAABF6
Threonine dehydrogenase {ECO:0000313|EMBL:AKF04451.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
A1-18-all-fractions_k255_2906897_2

Not on your lists

comp(840..1856)
DNA (1017bp) protein (339aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=mine drainage metagenome RepID=T1A152_9ZZZZ
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:EQD50582.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aldo/keto reductase
A1-18-all-fractions_k255_2906897_3
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1843..2205)
DNA (363bp) protein (121aa)
4-carboxymuconolactone decarboxylase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B712AC
pcaC; 4-carboxymuconolactone decarboxylase
4-carboxymuconolactone decarboxylase protein {ECO:0000313|EMBL:AEG71238.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
A1-18-all-fractions_k255_2906897_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2302..3207
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6AB17
Putative transcriptional regulatory protein,LysR family OprD regulatory protein {ECO:0000313|EMBL:CCV06090.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional regulator
A1-18-all-fractions_k255_2906897_5
unknown

Not on your lists

3240..3524
DNA (285bp) protein (95aa)

This feature has no annotations

A1-18-all-fractions_k255_2906897_6
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3580..4272)
DNA (693bp) protein (231aa)
Fis family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JC83_9SPHN
Fis family transcriptional regulator {ECO:0000313|EMBL:EQB19494.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
Fis family transcriptional regulator
A1-18-all-fractions_k255_2906897_7
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4262..5791)
DNA (1530bp) protein (510aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EU89_SPHCR
osmosensitive K+ channel signal transduction histidine kinase
A1-18-all-fractions_k255_2906897_8
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5908..7845
DNA (1938bp) protein (646aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030072B6
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
kup; KUP system potassium uptake protein
A1-18-all-fractions_k255_2906897_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7968..8585)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037CDB64
Putative two-component response regulator {ECO:0000313|EMBL:GAO39232.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
two component LuxR family transcriptional regulator
A1-18-all-fractions_k255_2906897_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8582..10228)
DNA (1647bp) protein (549aa)
Putative signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8Z1_NOVAD
signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:ABD25682.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
A1-18-all-fractions_k255_2906897_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10559..12895)
DNA (2337bp) protein (779aa)
putative signal transduction protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489FEC
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:AGH49304.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2906897_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13026..14201
DNA (1176bp) protein (392aa)
Signal transduction histidine kinase LytS n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S202_9SPHN
signal transduction histidine kinase LytS
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:AGH50025.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2906897_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14198..15001
DNA (804bp) protein (268aa)
LytTR family two component transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6A8_9SPHN
LytTR family two component transcriptional regulator
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:AGH50024.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2906897_14
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14976..15377
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035E236E
Response regulator {ECO:0000313|EMBL:KJV40828.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
response regulator receiver protein
A1-18-all-fractions_k255_2906897_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15366..16388)
DNA (1023bp) protein (341aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ATPase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7B95C
ATPase
A1-18-all-fractions_k255_2906897_16
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16503..17912)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D545_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83525.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
porin
A1-18-all-fractions_k255_2906897_17
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18207..19223
DNA (1017bp) protein (339aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57195
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
phosphate-binding protein
A1-18-all-fractions_k255_2906897_18
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19280..19972)
DNA (693bp) protein (231aa)
chemotaxis protein CheY n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288374B
Chemotaxis protein CheY {ECO:0000313|EMBL:AHE53819.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
two component transcriptional regulator
A1-18-all-fractions_k255_2906897_19
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19975..20664)
DNA (690bp) protein (230aa)
PhoU family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCE38
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
phosphate uptake regulator PhoU
A1-18-all-fractions_k255_2906897_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20677..21489)
DNA (813bp) protein (271aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Phosphate import ATP-binding protein PstB n=2 Tax=Rhodopseudomonas palustris RepID=PSTB_RHOPA
pstB; phosphate transporter ATP-binding protein
A1-18-all-fractions_k255_2906897_21
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21486..22325)
DNA (840bp) protein (280aa)
phosphate transporter permease subunit PtsA n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4E5A2
Phosphate ABC transporter permease {ECO:0000313|EMBL:KAK46212.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
pstA-2; phosphate ABC transporter permease protein PstA 2
A1-18-all-fractions_k255_2906897_22
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22325..23215)
DNA (891bp) protein (297aa)
phosphate ABC transporter permease n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B47061
Phosphate transporter permease subunit PstC {ECO:0000313|EMBL:KAK46213.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
phosphate ABC transporter permease
A1-18-all-fractions_k255_2906897_23
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23305..24426)
DNA (1122bp) protein (374aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57195
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
phosphate ABC transporter periplasmic phosphate-binding protein
A1-18-all-fractions_k255_2906897_24
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24486..25229
DNA (744bp) protein (248aa)
putative carboxyphosphonoenolpyruvate phosphonomutase protein (EC:4.1.3.30)
phosphonomutase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000366CC92
Uncharacterized protein {ECO:0000313|EMBL:GAO39732.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A1-18-all-fractions_k255_2906897_25
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(25226..26425)
DNA (1200bp) protein (400aa)
ABC transporter n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MIR5_9SPHN
ABC transporter {ECO:0000313|EMBL:CCW16846.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
ABC transporter permease
A1-18-all-fractions_k255_2906897_26
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26422..27381)
DNA (960bp) protein (320aa)
ABC transporter ATP-binding protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489B71
ABC-type transport system ATPase component
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_2906897_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27426..28499
DNA (1074bp) protein (358aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
Epoxyqueuosine reductase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CQN6_SPHYA
epoxyqueuosine reductase
A1-18-all-fractions_k255_2906897_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28460..28807)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630300
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO39997.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A1-18-all-fractions_k255_2906897_29
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28905..29900
DNA (996bp) protein (332aa)
PfkB protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2P6_9SPHN
PfkB protein
PfkB protein {ECO:0000313|EMBL:AGH50016.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2906897_30
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29897..31495)
DNA (1599bp) protein (533aa)
Amino acid permease family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0G0_9SPHN
Putative amino acid transporter {ECO:0000313|EMBL:GAO39999.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
amino acid transporter
Displaying items 1-30 of 42 in total

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