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A1-18-all-fractions_k255_3168638

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3168638_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..727)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CRN8_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73621.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
TonB-dependent receptor-like protein
A1-18-all-fractions_k255_3168638_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(773..2233)
DNA (1461bp) protein (487aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55567.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
TonB-dependent receptor-like protein
A1-18-all-fractions_k255_3168638_3
unknown

Not on your lists

comp(2671..2880)
DNA (210bp) protein (70aa)

This feature has no annotations

A1-18-all-fractions_k255_3168638_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3091..3540)
DNA (450bp) protein (150aa)
PAS/PAC domain protein n=2 Tax=Sphingobium RepID=I5BC42_9SPHN
PAS/PAC domain protein {ECO:0000313|EMBL:KGB58955.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
PAS/PAC domain protein
A1-18-all-fractions_k255_3168638_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3592..4068)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD503
Uncharacterized protein {ECO:0000313|EMBL:GAO39008.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
regulatory protein MarR
A1-18-all-fractions_k255_3168638_6
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4250..5224)
DNA (975bp) protein (325aa)
Two-component system sensor protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55566.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
fecR; Fe2+-dicitrate sensor membrane component
A1-18-all-fractions_k255_3168638_7
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5228..5803)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036CB96E
ECF-type sigma factor {ECO:0000313|EMBL:KFL46075.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
ECF-type sigma factor
A1-18-all-fractions_k255_3168638_8
unknown

Not on your lists

comp(5796..5927)
DNA (132bp) protein (44aa)

This feature has no annotations

A1-18-all-fractions_k255_3168638_9
unknown

Not on your lists

6157..6330
DNA (174bp) protein (58aa)

This feature has no annotations

A1-18-all-fractions_k255_3168638_10
unknown

Not on your lists

6353..7024
DNA (672bp) protein (224aa)

This feature has no annotations

A1-18-all-fractions_k255_3168638_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7099..7791
DNA (693bp) protein (231aa)
transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B47AD6
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABQ70948.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3168638_12
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7838..8845
DNA (1008bp) protein (336aa)
Muconate cycloisomerase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZM5_9PROT
Muconate cycloisomerase {ECO:0000313|EMBL:EGY01282.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
mandelate racemase/muconate lactonizing protein
A1-18-all-fractions_k255_3168638_13

Not on your lists

comp(8842..9888)
DNA (1047bp) protein (349aa)
Cellulase n=1 Tax=uncultured organism RepID=T1W9P4_9ZZZZ
Cellulase {ECO:0000313|EMBL:AGU11488.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
glycoside hydrolase
A1-18-all-fractions_k255_3168638_14

Not on your lists

9965..11284
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1WBC2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU11824.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
mannanase
A1-18-all-fractions_k255_3168638_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11271..12485)
DNA (1215bp) protein (405aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00036FA9AA
alpha-galactosidase
A1-18-all-fractions_k255_3168638_16
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12560..14170
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IWB1_9SPHN
Glycosyl hydrolases 35 family protein {ECO:0000313|EMBL:EZP54578.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
glycoside hydrolase
A1-18-all-fractions_k255_3168638_17
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14167..17022
DNA (2856bp) protein (952aa)
Maltodextrin glucosidase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MK32_9SPHN
Glycosyl hydrolases 31 family protein {ECO:0000313|EMBL:EZP54577.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
alpha-xylosidase
A1-18-all-fractions_k255_3168638_18
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17019..18593)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003697131
Alpha-L-fucosidase {ECO:0000313|EMBL:EJL34353.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
glycoside hydrolase family alpha-L-fucosidase
A1-18-all-fractions_k255_3168638_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18675..19694
DNA (1020bp) protein (340aa)
Putative oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GD59_SORC5
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AJP71738.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3168638_20
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19621..21852)
DNA (2232bp) protein (744aa)
beta-glucosidase (EC:3.2.1.21)
beta-glucosidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030DA2C4
Beta-glucosidase {ECO:0000313|EMBL:EZP53205.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
A1-18-all-fractions_k255_3168638_21
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21967..23112
DNA (1146bp) protein (382aa)
fumarylacetoacetate hydrolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036BD07A
fumarylacetoacetate (faa) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ADU13575.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
A1-18-all-fractions_k255_3168638_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23112..24548
DNA (1437bp) protein (479aa)
Aldehyde dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGH2_PHEZH
aldA; aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ACG78878.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_3168638_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24553..25311
DNA (759bp) protein (253aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FAB9C2
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AJP74446.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3168638_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25313..26188
DNA (876bp) protein (292aa)
gluconolaconase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000309CF7E
gluconolaconase
Gluconolaconase {ECO:0000313|EMBL:AJP72237.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3168638_25
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26167..28071
DNA (1905bp) protein (635aa)
putative sialic acid-specific 9-O-acetylesterase (EC:3.1.1.53)
Putative sialic acid-specific 9-O-acetylesterase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7X6_SPHJU
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_3168638_26
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28065..29777)
DNA (1713bp) protein (571aa)
Dehydratase, IlvD/Edd family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGG9_PHEZH
dihydroxy-acid dehydratase
Dehydratase, IlvD/Edd family {ECO:0000313|EMBL:ACG78875.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_3168638_27
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29865..31286)
DNA (1422bp) protein (474aa)
major facilitator transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000318C566
major facilitator transporter
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_3168638_28
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31381..32475)
DNA (1095bp) protein (365aa)
LacI family transcription regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631A66
LacI-family transcriptional regulator
LacI-family transcriptional regulator {ECO:0000313|EMBL:AGH50146.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3168638_29

Not on your lists

32530..32991
DNA (462bp) protein (154aa)
Glycosyl hydrolase family 3 N terminal domain (Fragment) n=1 Tax=uncultured organism RepID=T1WBM4_9ZZZZ
Glycosyl hydrolase family 3 N terminal domain {ECO:0000313|EMBL:AGU12233.1}; Flags: Fragment;; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
xylosidase/arabinosidase
Displaying 29 items

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