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A1-18-all-fractions_k255_3295669

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3295669_1
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(198..1205)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GQ92_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02163.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
A1-18-all-fractions_k255_3295669_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1240..1893)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024889D5
hypothetical protein
UPF0301 protein TS85_06365 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3295669_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1917..2405
DNA (489bp) protein (163aa)
Putative peroxiredoxin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZSQ9_9SPHN
Putative peroxiredoxin {ECO:0000313|EMBL:GAD48389.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
alkyl hydroperoxide reductase
A1-18-all-fractions_k255_3295669_4
Tetranychus urticae, Tetranychus, Acari, Arthropoda, Metazoa

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2531..2977
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1JQP9_TETUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:tetur01g04020.1}; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;"
A1-18-all-fractions_k255_3295669_5
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3020..3775)
DNA (756bp) protein (252aa)
Alpha/beta hydrolase fold n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVZ6_SPHAL
alpha/beta hydrolase
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABF52176.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
A1-18-all-fractions_k255_3295669_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3772..4218)
DNA (447bp) protein (149aa)
aldehyde-activating protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003047FF4
Uncharacterized protein {ECO:0000313|EMBL:GAO38617.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
glutathione-dependent formaldehyde-activating protein
A1-18-all-fractions_k255_3295669_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4265..5281
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S195_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48708.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3295669_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5281..5943
DNA (663bp) protein (221aa)
PKHD-type hydroxylase SCH01S_48_01170 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
PKHD-type hydroxylase Sala_1910 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Y1910_SPHAL
putative hydroxylase
A1-18-all-fractions_k255_3295669_9
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5940..6968)
DNA (1029bp) protein (343aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Sphingobium sp. AP49 RepID=J2LF65_9SPHN
asd; aspartate-semialdehyde dehydrogenase
A1-18-all-fractions_k255_3295669_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7085..9283
DNA (2199bp) protein (733aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00037E16B0
putative peptidase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_3295669_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9366..10193
DNA (828bp) protein (276aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA1D5
Uncharacterized protein {ECO:0000313|EMBL:GAO38753.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_3295669_12
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10190..12394)
DNA (2205bp) protein (735aa)
Peptidase S9B dipeptidylpeptidase IV domain protein n=2 Tax=Zymomonas mobilis RepID=Q5NMM8_ZYMMO
peptidase S9B dipeptidylpeptidase IV domain-containing protein
Peptidase S9B dipeptidylpeptidase IV domain protein {ECO:0000313|EMBL:AAV90032.2}; Flags: Precursor;; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).;"
A1-18-all-fractions_k255_3295669_13
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(12479..12910)
DNA (432bp) protein (144aa)
50S ribosomal protein L19 n=1 Tax=Sphingomonas melonis RepID=UPI00037C1BA9
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
50S ribosomal protein L19
A1-18-all-fractions_k255_3295669_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12907..13647)
DNA (741bp) protein (247aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
tRNA (guanine-N1)-methyltransferase n=2 Tax=Sphingomonas melonis RepID=UPI0003818FB3
tRNA (guanine-N1)-methyltransferase
A1-18-all-fractions_k255_3295669_15
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

13685..14647
DNA (963bp) protein (321aa)
thioredoxin reductase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AB2BE1
Thioredoxin reductase {ECO:0000313|EMBL:KIY13528.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
thioredoxin reductase
A1-18-all-fractions_k255_3295669_16
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(14644..15138)
DNA (495bp) protein (165aa)
Ribosome maturation factor RimM n=1 Tax=Sphingomonas sp. S17 RepID=F3WV03_9SPHN
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
16S rRNA processing protein RimM
A1-18-all-fractions_k255_3295669_17
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists


comp(15141..15788)
DNA (648bp) protein (216aa)
SSU ribosomal protein S16P n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPJ0_SPHAL
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
30S ribosomal protein S16
A1-18-all-fractions_k255_3295669_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15818..16771)
DNA (954bp) protein (318aa)
Signal recognition particle protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWF7_9SPHN
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
signal recognition particle protein
Displaying 18 items

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