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A1-18-all-fractions_k255_3361575

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3361575_1
unknown

Not on your lists

2..181
DNA (180bp) protein (60aa)

This feature has no annotations

A1-18-all-fractions_k255_3361575_2
unknown

Not on your lists

comp(194..439)
DNA (246bp) protein (82aa)

This feature has no annotations

A1-18-all-fractions_k255_3361575_3
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(568..996)
DNA (429bp) protein (143aa)
inosine-5-monophosphate dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003161A7C
Uncharacterized protein {ECO:0000313|EMBL:KIY12826.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
CBS domain-containing protein
A1-18-all-fractions_k255_3361575_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1066..1350
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003615AA4
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
A1-18-all-fractions_k255_3361575_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1350..1727
DNA (378bp) protein (126aa)
Thioesterase superfamily protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVP4_9SPHN
thioesterase superfamily protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_3361575_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1734..2354)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036F2ACC
Uncharacterized protein {ECO:0000313|EMBL:GAO39829.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_3361575_7
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2594..3421)
DNA (828bp) protein (276aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A377
HemK family modification methylase
A1-18-all-fractions_k255_3361575_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3418..4503)
DNA (1086bp) protein (362aa)
Peptide chain release factor 1 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RF1_SPHWW
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3361575_9
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4500..5735)
DNA (1236bp) protein (412aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I341_9SPHN
A1-18-all-fractions_k255_3361575_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5779..8469)
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000361792B
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AIT07507.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_3361575_11
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8543..10474
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F3484
M61 glycyl aminopeptidase family protein {ECO:0000313|EMBL:EZP49332.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
peptidase M61
A1-18-all-fractions_k255_3361575_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10494..12014
DNA (1521bp) protein (507aa)
amidase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4B0E4
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:ENZ81211.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
amidase
A1-18-all-fractions_k255_3361575_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12068..12382)
DNA (315bp) protein (105aa)
Small multidrug resistance protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V865_SPHWW
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ABQ68481.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3361575_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12433..13074
DNA (642bp) protein (214aa)
membrane protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5289F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ68482.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3361575_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13071..13973)
DNA (903bp) protein (301aa)
permease n=1 Tax=Sphingomonas wittichii RepID=UPI0002F1DD66
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ68484.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3361575_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14001..14480)
DNA (480bp) protein (160aa)
aspartyl protease n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893D5
aspartyl protease
Aspartyl protease {ECO:0000313|EMBL:AGH50235.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3361575_17
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14681..15757)
DNA (1077bp) protein (359aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184190}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4344C
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
A1-18-all-fractions_k255_3361575_18
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15914..18055
DNA (2142bp) protein (714aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000300F289
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
A1-18-all-fractions_k255_3361575_19
unknown

Not on your lists

18077..18538
DNA (462bp) protein (154aa)

This feature has no annotations

A1-18-all-fractions_k255_3361575_20
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18578..20425
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TK50_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK53138.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
A1-18-all-fractions_k255_3361575_21
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20422..20667)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WK68_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU09984.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
A1-18-all-fractions_k255_3361575_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20876..21772)
DNA (897bp) protein (299aa)
membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI00026312EC
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP73033.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3361575_23
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21866..22786
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003748FBA
Putative asparaginase {ECO:0000313|EMBL:GAM00880.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
asparaginase
A1-18-all-fractions_k255_3361575_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22768..23907)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1K4_9SPHN
DNA, contig: SP623 {ECO:0000313|EMBL:GAN13721.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
A1-18-all-fractions_k255_3361575_25
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23940..24401)
DNA (462bp) protein (154aa)
Endoribonuclease L-PSP n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VA22_SPHWW
Endoribonuclease {ECO:0000313|EMBL:KEO86614.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
endoribonuclease L-PSP
A1-18-all-fractions_k255_3361575_26
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24433..25176)
DNA (744bp) protein (248aa)
Oxidoreductase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EC59_9SPHN
malonic semialdehyde reductase
Oxidoreductase {ECO:0000313|EMBL:EHJ61158.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
A1-18-all-fractions_k255_3361575_27
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25480..25953
DNA (474bp) protein (158aa)
chemotaxis protein CheY n=1 Tax=Sphingobium xenophagum RepID=UPI0002FE7396
response regulator receiver protein
Chemotaxis protein CheY {ECO:0000313|EMBL:EQB02216.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
A1-18-all-fractions_k255_3361575_28
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25962..26129)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037FCA00
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
rpmG; 50S ribosomal protein L33
A1-18-all-fractions_k255_3361575_29
unknown

Not on your lists

26286..26594
DNA (309bp) protein (103aa)

This feature has no annotations

A1-18-all-fractions_k255_3361575_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26627..28228
DNA (1602bp) protein (534aa)
ATP-dependent DNA ligase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCFB6
ATP-dependent DNA ligase
ATP-dependent DNA ligase {ECO:0000313|EMBL:AJP70831.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying items 1-30 of 32 in total

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