ggKbase home page

A1-18-all-fractions_k255_3432608

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3432608_1
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88..1077)
DNA (990bp) protein (330aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6G7_SPHWW
GTP cyclohydrolase subunit MoaA
A1-18-all-fractions_k255_3432608_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1080..1859)
DNA (780bp) protein (260aa)
molybdopterin-binding protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E989
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48265.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3432608_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1895..2725
DNA (831bp) protein (277aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:AJP71088.1}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
methionine aminopeptidase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A45
methionine aminopeptidase
A1-18-all-fractions_k255_3432608_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2815..3690
DNA (876bp) protein (292aa)
ABC transporter related protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPP2_CAUST
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:AHE53382.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ABC transporter
A1-18-all-fractions_k255_3432608_5
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3703..7299
DNA (3597bp) protein (1199aa)
aminopeptidase N n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E7E7
aminopeptidase
Tax=BJP_IG2102_Porphyrobacter_62_18
A1-18-all-fractions_k255_3432608_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7397..7786
DNA (390bp) protein (130aa)
thioesterase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000363EECE
Thioesterase superfamily {ECO:0000313|EMBL:GAO54693.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
thioesterase superfamily protein
A1-18-all-fractions_k255_3432608_7
unknown

Not on your lists

comp(7788..8327)
DNA (540bp) protein (180aa)

This feature has no annotations

A1-18-all-fractions_k255_3432608_8
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..10370
DNA (1893bp) protein (631aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0003110874
Uncharacterized protein {ECO:0000313|EMBL:KEO96756.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
protein kinase
A1-18-all-fractions_k255_3432608_9
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10432..11091)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F3A1F9
Predicted hydrolase of the alpha/beta-hydrolase fold {ECO:0000313|EMBL:GAM98786.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
A1-18-all-fractions_k255_3432608_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11091..11840)
DNA (750bp) protein (250aa)
Nucleotidyltransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0HVD7_9SPHN
Nucleotidyltransferase {ECO:0000313|EMBL:EQB03255.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
nucleotidyl transferase
A1-18-all-fractions_k255_3432608_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11918..12256
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II 1 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B39B0F
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ABQ71169.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3432608_12
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

12286..12483
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E02E
Uncharacterized protein {ECO:0000313|EMBL:KIY13993.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
A1-18-all-fractions_k255_3432608_13
unknown

Not on your lists

comp(12477..12959)
DNA (483bp) protein (161aa)

This feature has no annotations

A1-18-all-fractions_k255_3432608_14
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13141..13983
DNA (843bp) protein (281aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen III oxidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9G4_9SPHN
A1-18-all-fractions_k255_3432608_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13980..14594
DNA (615bp) protein (205aa)
GCN5-like N-acetyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489433
N-acetyltransferase GCN5
N-acetyltransferase GCN5 {ECO:0000313|EMBL:AGH48139.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3432608_16
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14540..15364)
DNA (825bp) protein (275aa)
putative conserved transmembrane protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631AC8
putative conserved transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:KEP22615.1}; Flags: Fragment;; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
A1-18-all-fractions_k255_3432608_17
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15460..16125
DNA (666bp) protein (222aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
lipB; lipoyl(octanoyl) transferase (EC:2.3.1.-)
Octanoyltransferase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGJ0_9SPHN
A1-18-all-fractions_k255_3432608_18
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

16209..16457
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:EYC00042.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
A1-18-all-fractions_k255_3432608_19
unknown

Not on your lists

16549..16875
DNA (327bp) protein (109aa)

This feature has no annotations

A1-18-all-fractions_k255_3432608_20
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16879..17511)
DNA (633bp) protein (211aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HHZ6_9SPHN
putative organic radical activating enzyme
A1-18-all-fractions_k255_3432608_21
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17508..18131)
DNA (624bp) protein (208aa)
7-cyano-7-deazaguanine synthase {ECO:0000255|HAMAP-Rule:MF_01633}; EC=6.3.4.20 {ECO:0000255|HAMAP-Rule:MF_01633};; 7-cyano-7-carbaguanine synthase {ECO:0000255|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000255|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000255|HAMAP-Rule:MF_01633}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
7-cyano-7-deazaguanine synthase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=QUEC_SPHWW
exsB protein
A1-18-all-fractions_k255_3432608_22
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18170..18643)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EFQ8_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ80889.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
A1-18-all-fractions_k255_3432608_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18674..19090)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RX74_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48146.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3432608_24
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19141..20082)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000360C48E
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
Hsp33 protein
A1-18-all-fractions_k255_3432608_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20133..21323)
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
Acetylornithine aminotransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9F7_9SPHN
argD; acetylornithine transaminase protein
A1-18-all-fractions_k255_3432608_26
unknown

Not on your lists

comp(21453..21845)
DNA (393bp) protein (131aa)

This feature has no annotations

A1-18-all-fractions_k255_3432608_27
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21966..22799)
DNA (834bp) protein (278aa)
multidrug ABC transporter permease n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248943E
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3432608_28
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22857..23519
DNA (663bp) protein (221aa)
GcrA cell cycle regulator n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000377A1EC
GcrA cell cycle regulator {ECO:0000313|EMBL:GAO55717.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
GcrA cell cycle regulator
A1-18-all-fractions_k255_3432608_29
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23532..24563
DNA (1032bp) protein (344aa)
phytanoyl-CoA dioxygenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000368F958
Uncharacterized protein {ECO:0000313|EMBL:AHE52102.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
phytanoyl-CoA dioxygenase
A1-18-all-fractions_k255_3432608_30
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24573..25592)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00036731CD
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO38183.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
araC family transcriptional regulator
Displaying items 1-30 of 40 in total

View Taxonomy