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A1-18-all-fractions_k255_3621545

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3621545_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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201..1595
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003719073
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
dnaA; chromosomal replication initiation protein
A1-18-all-fractions_k255_3621545_2
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1612..2247)
DNA (636bp) protein (212aa)
ABC transporter permease n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EI24_9RHOB
ABC transporter permease {ECO:0000313|EMBL:ESW60771.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
hypothetical protein
A1-18-all-fractions_k255_3621545_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2253..3260)
DNA (1008bp) protein (336aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
tryptophanyl-tRNA ligase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase, partial n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B407DE
A1-18-all-fractions_k255_3621545_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3257..4846)
DNA (1590bp) protein (530aa)
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E25F2C
membrane protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3621545_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4878..5399)
DNA (522bp) protein (174aa)
Protein-export protein SecB n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JB54_9SPHN
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
protein-export protein secB
A1-18-all-fractions_k255_3621545_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5508..6236
DNA (729bp) protein (243aa)
Import inner membrane translocase subunit Tim44 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4T8_9SPHN
import inner membrane translocase subunit Tim44
Import inner membrane translocase subunit Tim44 {ECO:0000313|EMBL:AGH50791.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3621545_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6233..7426
DNA (1194bp) protein (398aa)
MltA domain-containing protein n=1 Tax=Sphingomonas wittichii RepID=UPI000309D9F4
MltA domain-containing protein
MltA domain protein {ECO:0000313|EMBL:ABQ70176.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3621545_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7407..7940
DNA (534bp) protein (178aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI00035D675E
Smr domain protein {ECO:0000313|EMBL:EZP52206.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
DNA mismatch repair protein MutS
A1-18-all-fractions_k255_3621545_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8017..9702
DNA (1686bp) protein (562aa)
response regulator PleD n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024885A0
response regulator PleD
Response regulator PleD {ECO:0000313|EMBL:AJP74510.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3621545_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9699..10826)
DNA (1128bp) protein (376aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
succinyl-diaminopimelate desuccinylase n=1 Tax=Sphingomonas wittichii RepID=UPI00036249DE
A1-18-all-fractions_k255_3621545_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11009..13087
DNA (2079bp) protein (693aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEK1_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY81881.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
A1-18-all-fractions_k255_3621545_12
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13115..13582
DNA (468bp) protein (156aa)
Cupin 2, conserved barrel n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRJ1_SPHAL
cupin
Cupin 2, conserved barrel {ECO:0000313|EMBL:ABF53731.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
A1-18-all-fractions_k255_3621545_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13583..14251)
DNA (669bp) protein (223aa)
Glutathione S-transferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SJP1_9SPHN
Glutathione S-transferase {ECO:0000313|EMBL:AHE53159.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
glutathione S-transferase
A1-18-all-fractions_k255_3621545_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14263..14907)
DNA (645bp) protein (215aa)
Probable GTP-binding protein EngB n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S772_9SPHN
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
engB; GTP-binding protein YsxC
A1-18-all-fractions_k255_3621545_15
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14904..16610)
DNA (1707bp) protein (569aa)
Membrane protein insertase YidC n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K860_9SPHN
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
yidC; preprotein translocase YidC subunit
A1-18-all-fractions_k255_3621545_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16621..16833)
DNA (213bp) protein (71aa)
membrane protein insertion efficiency factor n=1 Tax=Sphingomonas melonis RepID=UPI000365247B
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
A1-18-all-fractions_k255_3621545_17
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16830..17336)
DNA (507bp) protein (169aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
ribonuclease P n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B5E15B
ribonuclease P protein component
A1-18-all-fractions_k255_3621545_18
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17384..17695)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024885A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50803.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3621545_19
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17807..19585)
DNA (1779bp) protein (593aa)
thiamine pyrophosphate protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F4E5C
Pyruvate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:EZP51041.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
thiamine pyrophosphate protein
A1-18-all-fractions_k255_3621545_20
unknown

Not on your lists

19730..19993
DNA (264bp) protein (88aa)

This feature has no annotations

A1-18-all-fractions_k255_3621545_21
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20005..21258
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBZ4_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69810.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_3621545_22
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21255..21380)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARZ2_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD00203.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
A1-18-all-fractions_k255_3621545_23
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21533..22669)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0ISP6_9SPHN
Putative SleB-like protein {ECO:0000313|EMBL:GAO39559.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SleB-like protein
A1-18-all-fractions_k255_3621545_24
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22713..22955)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTI5_SPHAL
Putative membrane protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
A1-18-all-fractions_k255_3621545_25
unknown

Not on your lists

comp(22976..23125)
DNA (150bp) protein (50aa)

This feature has no annotations

A1-18-all-fractions_k255_3621545_26
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(23284..23898)
DNA (615bp) protein (205aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9J0_SPHWW
5-formyltetrahydrofolate cyclo-ligase
A1-18-all-fractions_k255_3621545_27
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(24067..24390)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9J2_SPHWW
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
A1-18-all-fractions_k255_3621545_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24682..26670
DNA (1989bp) protein (663aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Transketolase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S9T5_9SPHN
transketolase
A1-18-all-fractions_k255_3621545_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26667..27674
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5G0_9SPHN
glyceraldehyde-3-phosphate dehydrogenase
A1-18-all-fractions_k255_3621545_30
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

27676..28911
DNA (1236bp) protein (412aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
Phosphoglycerate kinase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CNL9_SPHYA
pgk; phosphoglycerate kinase
Displaying items 1-30 of 43 in total

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