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A1-18-all-fractions_k255_3679973

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3679973_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1269
DNA (1269bp) protein (423aa)
ATPase AAA n=2 Tax=Bacteria RepID=UPI0003B5E7A4
Two-component response regulator NtrX {ECO:0000313|EMBL:GAO38519.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
two component sigma-54 specific Fis family transcriptional regulator
A1-18-all-fractions_k255_3679973_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1281..1775
DNA (495bp) protein (165aa)
RNA-binding protein Hfq n=1 Tax=Acetobacter sp. CAG:977 RepID=R5PYH7_9PROT
RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|SAAS:SAAS00067493, ECO:0000313|EMBL:AJP71642.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_3679973_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1826..3079
DNA (1254bp) protein (418aa)
GTPase HflX n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0J6_9SPHN
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
HSR1-like GTP-binding protein
A1-18-all-fractions_k255_3679973_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3058..3810)
DNA (753bp) protein (251aa)
mazG; nucleoside triphosphate hydrolase (EC:3.6.1.19)
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:AJP71644.1}; EC=3.6.1.19 {ECO:0000313|EMBL:AJP71644.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
nucleotide pyrophosphohydrolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6DDCE
A1-18-all-fractions_k255_3679973_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3885..4475)
DNA (591bp) protein (197aa)
putative aspartyl protease n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B54D
putative aspartyl protease
Putative aspartyl protease {ECO:0000313|EMBL:AGH47857.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3679973_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4472..5236)
DNA (765bp) protein (255aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSZ6_9SPHN
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12961.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
beta-lactamase domain-containing protein
A1-18-all-fractions_k255_3679973_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5233..6009)
DNA (777bp) protein (259aa)
Hydrolase, TatD family n=1 Tax=Novosphingobium sp. AP12 RepID=J3A5L7_9SPHN
TatD-related deoxyribonuclease {ECO:0000313|EMBL:KHS48535.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
LuxR family transcriptional regulator
A1-18-all-fractions_k255_3679973_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6006..7520)
DNA (1515bp) protein (505aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3I8_SPHWW
A1-18-all-fractions_k255_3679973_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7550..8542)
DNA (993bp) protein (331aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:ABQ66853.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABQ66853.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036BB5EC
A1-18-all-fractions_k255_3679973_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8539..9162)
DNA (624bp) protein (208aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Thymidylate kinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SB05_9SPHN
A1-18-all-fractions_k255_3679973_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9159..10337)
DNA (1179bp) protein (393aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
peptidase S11 n=1 Tax=Sphingomonas melonis RepID=UPI0003604545
Sphingomonas taxi strain 30a NODE_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29930.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_3679973_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10379..10876)
DNA (498bp) protein (166aa)
lytic transglycosylase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B555
Uncharacterized protein {ECO:0000313|EMBL:AHE54060.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
membrane-bound lytic murein transglycosylase B
Displaying 12 items

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