ggKbase home page

A1-18-all-fractions_k255_4023134

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4023134_1
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..309
DNA (309bp) protein (103aa)
DNA topoisomerase IB (Poxvirus type) n=1 Tax=alpha proteobacterium JLT2015 RepID=M2S9C4_9PROT
DNA topoisomerase
DNA topoisomerase IB (Poxvirus type) {ECO:0000313|EMBL:EMD81985.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
A1-18-all-fractions_k255_4023134_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

360..1388
DNA (1029bp) protein (343aa)
mechanosensitive ion channel protein MscS n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488676
Uncharacterized protein {ECO:0000313|EMBL:AHE54674.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
mechanosensitive ion channel MscS
A1-18-all-fractions_k255_4023134_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1431..1886
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W5S7_9CAUL
Nodulation protein N {ECO:0000313|EMBL:KFG70110.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
MaoC domain-containing protein dehydratase
A1-18-all-fractions_k255_4023134_4
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1897..3075
DNA (1179bp) protein (393aa)
Putative Acetyl-CoA acetyltransferase (Acetoacetyl-CoA thiolase) n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CZS6_DEIDV
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KEF35355.1}; TaxID=1489678 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus sp. RL.;"
acetyl-CoA acetyltransferase
A1-18-all-fractions_k255_4023134_5
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3111..3905
DNA (795bp) protein (265aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028893AB
band 7 protein
Band 7 protein {ECO:0000313|EMBL:ADU14381.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
A1-18-all-fractions_k255_4023134_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3929..4180
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4Z079_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:GAO39865.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_4023134_7
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4177..5577
DNA (1401bp) protein (467aa)
multidrug MFS transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA73A
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL35388.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
multidrug resistance protein Stp
A1-18-all-fractions_k255_4023134_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5779..7008)
DNA (1230bp) protein (410aa)
polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Sphingomonas elodea RepID=UPI0002631DD8
esterase
Esterase {ECO:0000313|EMBL:AJP70954.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_4023134_9
unknown

Not on your lists

comp(6951..7157)
DNA (207bp) protein (69aa)

This feature has no annotations

A1-18-all-fractions_k255_4023134_10
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7111..8064)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C04D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD53943.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
A1-18-all-fractions_k255_4023134_11
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8203..9987
DNA (1785bp) protein (595aa)
Lipid ABC transporter ATPase/inner membrane protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4L3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE52432.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
lipid ABC transporter ATPase/inner membrane protein
A1-18-all-fractions_k255_4023134_12
Tetranychus urticae, Tetranychus, Acari, Arthropoda, Metazoa

Not on your lists

comp(9984..10670)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1JQP9_TETUR
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:tetur01g04020.1}; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;"
cell wall surface anchor family protein
A1-18-all-fractions_k255_4023134_13
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11011..11466)
DNA (456bp) protein (152aa)
UPI0003D66C57 related cluster n=1 Tax=unknown RepID=UPI0003D66C57
Uncharacterized protein {ECO:0000313|EMBL:ETI64785.1}; Flags: Fragment;; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
A1-18-all-fractions_k255_4023134_14
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11472..12002)
DNA (531bp) protein (177aa)
poly (3-hydroxybutyrate) depolymerase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A7B
polyhydroxyalkonate synthesis repressor PhaR
Polyhydroxyalkonate synthesis repressor PhaR {ECO:0000313|EMBL:AGH50952.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4023134_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12109..13071
DNA (963bp) protein (321aa)
poly-beta-hydroxybutyrate polymerase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A7A
Poly(3-hydroxyalkanoate) synthetase-like protein
Poly(3-hydroxyalkanoate) synthetase-like protein {ECO:0000313|EMBL:AGH50951.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4023134_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13259..14656)
DNA (1398bp) protein (466aa)
transporter n=1 Tax=Sphingomonas elodea RepID=UPI000263058F
transporter
Transporter {ECO:0000313|EMBL:AIT05479.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_4023134_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14668..17838)
DNA (3171bp) protein (1057aa)
transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBDE
RND transporter
RND transporter {ECO:0000313|EMBL:AJP71796.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_4023134_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17887..19167)
DNA (1281bp) protein (427aa)
secretion protein HylD n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E7EE68
secretion protein HylD
Secretion protein HylD {ECO:0000313|EMBL:AJP71797.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_4023134_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19164..19586)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSP9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT05482.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_4023134_20
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19895..20506)
DNA (612bp) protein (204aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI000263088B
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EMD81877.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
TetR family transcriptional regulator
A1-18-all-fractions_k255_4023134_21
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20618..21961)
DNA (1344bp) protein (448aa)
secretion protein HylD n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037EEC5C
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:EJL21090.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
HlyD family type I secretion membrane fusion protein
A1-18-all-fractions_k255_4023134_22
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21958..22230)
DNA (273bp) protein (91aa)
hypothetical protein, partial n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000377E16D
Type I secretion system ATPase {ECO:0000313|EMBL:EIZ80358.1}; Flags: Fragment;; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
expD1; ABC transporter
Displaying 22 items

View Taxonomy