ggKbase home page

A1-18-all-fractions_k255_4295930

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4295930_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1..198)
DNA (198bp) protein (66aa)
SSU ribosomal protein S16P n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPJ0_SPHAL
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
30S ribosomal protein S16
A1-18-all-fractions_k255_4295930_2
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists


comp(228..1709)
DNA (1482bp) protein (494aa)
Signal recognition particle protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWF7_9SPHN
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
signal recognition particle protein
A1-18-all-fractions_k255_4295930_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1919..2752
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F9B1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX63969.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
methylase involved in ubiquinone/menaquinone biosynthesis
A1-18-all-fractions_k255_4295930_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2780..3235)
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO39165.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A1-18-all-fractions_k255_4295930_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3293..4237
DNA (945bp) protein (315aa)
alpha-L-glutamate ligase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D20
alpha-L-glutamate ligase
Alpha-L-glutamate ligase {ECO:0000313|EMBL:AIT07739.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_4295930_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4234..5283
DNA (1050bp) protein (350aa)
alkanesulfonate monooxygenase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287EEF3
Putative FMNH2-dependent monooxygenase {ECO:0000313|EMBL:GAO37948.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
alkanesulfonate monooxygenase
A1-18-all-fractions_k255_4295930_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5288..6088
DNA (801bp) protein (267aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000255|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000255|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00197};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Diaminopimelate epimerase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=DAPF_SPHWW
A1-18-all-fractions_k255_4295930_8
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6085..7251
DNA (1167bp) protein (389aa)
2-methylthioadenine synthase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B313FD
2-methylthioadenine synthase {ECO:0000313|EMBL:ETI60428.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
MiaB-like tRNA modifying protein
A1-18-all-fractions_k255_4295930_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7248..8165
DNA (918bp) protein (306aa)
cell division protein FtsY n=1 Tax=Sphingomonas wittichii RepID=UPI00030659C4
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
signal recognition particle-docking protein FtsY
A1-18-all-fractions_k255_4295930_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8162..8776
DNA (615bp) protein (205aa)
Probable intracellular septation protein A n=1 Tax=Sphingomonas sp. S17 RepID=F3WV12_9SPHN
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
intracellular septation protein A
A1-18-all-fractions_k255_4295930_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8773..9714
DNA (942bp) protein (314aa)
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBZ5_9SPHN
ABC transporter {ECO:0000313|EMBL:ENY81253.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ABC-type transport system ATPase component
A1-18-all-fractions_k255_4295930_12
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9711..10472
DNA (762bp) protein (254aa)
ABC-2 type transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVC0_BREDI
ABC transporter
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
A1-18-all-fractions_k255_4295930_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10462..11121)
DNA (660bp) protein (220aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414, ECO:0000313|EMBL:AJP71958.1}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
superoxide dismutase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003673328
superoxide dismutase
A1-18-all-fractions_k255_4295930_14
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11306..11878
DNA (573bp) protein (191aa)
Membrane-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VAH0_SPHWW
Membrane protein {ECO:0000313|EMBL:KKC23724.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
A1-18-all-fractions_k255_4295930_15
unknown

Not on your lists

comp(11908..12015)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 15 items

View Taxonomy