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A1-18-all-fractions_k255_1103324

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1103324_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..816)
DNA (816bp) protein (272aa)
PhoH family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWT4_9SPHN
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AGH47991.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1103324_2
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(816..2123)
DNA (1308bp) protein (436aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECW4_9SPHN
(dimethylallyl)adenosine tRNA methylthiotransferase
A1-18-all-fractions_k255_1103324_3
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2120..2830)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HKP9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16911.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
phospholipid/glycerol acyltransferase
A1-18-all-fractions_k255_1103324_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2880..3302)
DNA (423bp) protein (141aa)
Ferric uptake regulation protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILM3_9SPHN
fur; ferric uptake regulation protein
Ferric uptake regulation protein {ECO:0000313|EMBL:BAK67616.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
A1-18-all-fractions_k255_1103324_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3346..3771)
DNA (426bp) protein (142aa)
Putative transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2WUG1_9SPHN
Putative MucR family transcriptional regulator {ECO:0000313|EMBL:GAO40784.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
MucR family transcriptional regulator
A1-18-all-fractions_k255_1103324_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3892..4371)
DNA (480bp) protein (160aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWB8_9SPHN
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AGH47985.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1103324_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4371..4982)
DNA (612bp) protein (204aa)
Peptidase M22, glycoprotease n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0L2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO40782.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
peptidase M22, glycoprotease
A1-18-all-fractions_k255_1103324_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5031..5603)
DNA (573bp) protein (191aa)
iron transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024892FF
nitrogen-fixing NifU-like
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_1103324_9
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5646..6209)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037AAACE
Uncharacterized protein {ECO:0000313|EMBL:KCZ52537.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;"
hypothetical protein
A1-18-all-fractions_k255_1103324_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6218..7120)
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3C2_9SPHN
3-hydroxyisobutyrate dehydrogenase
A1-18-all-fractions_k255_1103324_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7123..7899)
DNA (777bp) protein (259aa)
enoyl-CoA hydratase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000316B245
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:GAO40758.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
short chain enoyl-CoA hydratase
A1-18-all-fractions_k255_1103324_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..8955)
DNA (1053bp) protein (351aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFF3_9SPHN
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:GAO40759.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
enoyl-CoA hydratase/isomerase
A1-18-all-fractions_k255_1103324_13
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8952..10094)
DNA (1143bp) protein (381aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0I733_9SPHN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EQB05429.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
A1-18-all-fractions_k255_1103324_14
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10107..10727)
DNA (621bp) protein (207aa)
gst; glutathione S-transferase (EC:2.5.1.18)
Gst n=1 Tax=Methylococcus capsulatus RepID=UPI00032006EF
Glutathione S-transferase {ECO:0000313|EMBL:KFA90130.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
A1-18-all-fractions_k255_1103324_15
unknown

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comp(10743..10994)
DNA (252bp) protein (84aa)

This feature has no annotations

A1-18-all-fractions_k255_1103324_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10978..11463)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y809_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49316.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
A1-18-all-fractions_k255_1103324_17
unknown

Not on your lists

comp(11523..11960)
DNA (438bp) protein (146aa)

This feature has no annotations

A1-18-all-fractions_k255_1103324_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12024..12992)
DNA (969bp) protein (323aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HMQ0_9SPHN
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EZP74176.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
methylmalonate-semialdehyde dehydrogenase
Displaying 18 items

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