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A1-18-all-fractions_k255_1135826

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1135826_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..566)
DNA (564bp) protein (188aa)
60 kDa chaperonin n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ73_9SPHN
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
groEL; molecular chaperone GroEL
A1-18-all-fractions_k255_1135826_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(617..904)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMW8_SPHYA
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
molecular chaperone GroES
A1-18-all-fractions_k255_1135826_3
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1038..2432)
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0T3_9SPHN
MATE efflux family protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
A1-18-all-fractions_k255_1135826_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2528..4390
DNA (1863bp) protein (621aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
Signal peptide peptidase SppA, 67K type n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EV74_SPHCR
signal peptide peptidase SppA
A1-18-all-fractions_k255_1135826_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4419..5816)
DNA (1398bp) protein (466aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
dihydrolipoamide dehydrogenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003811434
dihydrolipoamide dehydrogenase
A1-18-all-fractions_k255_1135826_6
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(6022..7332)
DNA (1311bp) protein (437aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex {ECO:0000256|RuleBase:RU361138}; EC=2.3.1.61 {ECO:0000256|RuleBase:RU361138};; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
2-oxoglutarate dehydrogenase E2 component n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SD08_9SPHN
2-oxoglutarate dehydrogenase E2 component
A1-18-all-fractions_k255_1135826_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7342..10170)
DNA (2829bp) protein (943aa)
sucA; 2-oxoglutarate dehydrogenase (EC:1.2.4.2)
MFS transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003677C92
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:GAO39511.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A1-18-all-fractions_k255_1135826_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10167..11054)
DNA (888bp) protein (296aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
succinyl-CoA synthetase subsunit alpha n=1 Tax=Sphingomonas melonis RepID=UPI0003734E34
succinyl-CoA synthetase subunit alpha
A1-18-all-fractions_k255_1135826_9
Sphingomonas sp. NX-3, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11051..12028)
DNA (978bp) protein (326aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=863935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NX-3.;"
malate dehydrogenase (EC:1.1.1.37)
malate dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI0001709219
A1-18-all-fractions_k255_1135826_10
unknown

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12232..12564
DNA (333bp) protein (111aa)

This feature has no annotations

A1-18-all-fractions_k255_1135826_11
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12722..13093
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VN81_POLNA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
A1-18-all-fractions_k255_1135826_12
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13296..14072
DNA (777bp) protein (259aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P7W4_9SPHN
A1-18-all-fractions_k255_1135826_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14069..14566
DNA (498bp) protein (166aa)
Phenylacetic acid degradation-like protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYI5_9SPHN
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-like protein {ECO:0000313|EMBL:AGH48596.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1135826_14
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14563..15672
DNA (1110bp) protein (370aa)
AFG1-like ATPase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X3J8_9SPHN
DNA, contig: SP659 {ECO:0000313|EMBL:GAN15519.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
AFG1 family ATPase
A1-18-all-fractions_k255_1135826_15
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15724..17154
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036583BE
Peptidase M20 family protein {ECO:0000313|EMBL:GAO40897.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_1135826_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17228..18661
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036583BE
Peptidase M20 family protein {ECO:0000313|EMBL:GAO40897.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_1135826_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18658..19119)
DNA (462bp) protein (154aa)
Alkyl hydroperoxide reductase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3D4_9SPHN
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AGH48969.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1135826_18
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19121..20659)
DNA (1539bp) protein (513aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
glutamate-ammonia ligase adenylyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A016
glutamate-ammonia-ligase adenylyltransferase
Displaying 18 items

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