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A1-18-all-fractions_k255_936584_22

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(16942..17283)

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 113.0
  • Bit_score: 174
  • Evalue 9.20e-42
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 113.0
  • Bit_score: 174
  • Evalue 4.60e-41
DNA-directed RNA polymerase subunit omega n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD04E0 similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 113.0
  • Bit_score: 176
  • Evalue 1.50e-41

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Taxonomy

Sphingomonas sp. MM-1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGCGCGCGTTACGGTTGAAGATTGTGTAGACAAAATCCCGAACAGGTTCGATCTCGTCCTGCTCGCGGCCCAACGCGCTCGTCAGATTTCGGGCGGCGCAGACCTGACCATCGATCGTGATCGGGACAAAAATCCCGTCGTGGCGCTTCGCGAGATCGCAGACGTCACTGTCAAGCCGCGCGATCTTGAGGAGGCAGTCGTCACCAACCTGCAGAAGGTACGGATCGACGAAGAGGACGAGACCGAAGAGCTGGCGTCGCTGAGCGAGGCTGCCGAGGCACTGCGGCTCACCGCCGCCGCGCCGCCGCGCCCCACTCCGTCCGGCGGCGACTACGAGTAA
PROTEIN sequence
Length: 114
MARVTVEDCVDKIPNRFDLVLLAAQRARQISGGADLTIDRDRDKNPVVALREIADVTVKPRDLEEAVVTNLQKVRIDEEDETEELASLSEAAEALRLTAAAPPRPTPSGGDYE*