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A1-18-all-fractions_k255_936584

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_936584_1
unknown

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)

This feature has no annotations

A1-18-all-fractions_k255_936584_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

382..786
DNA (405bp) protein (135aa)
aldehyde-activating protein n=1 Tax=Methyloferula stellata RepID=UPI00036BC1FA
Uncharacterized protein {ECO:0000313|EMBL:GAO38653.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
glutathione-dependent formaldehyde-activating protein
A1-18-all-fractions_k255_936584_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(839..1618)
DNA (780bp) protein (260aa)
Putative 3-oxoadipate enol-lactonase n=1 Tax=mine drainage metagenome RepID=E6PD14_9ZZZZ
alpha/beta hydrolase fold protein
Tax=RBG_16_Chloroflexi_68_14_curated
A1-18-all-fractions_k255_936584_4
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1664..2140
DNA (477bp) protein (159aa)
Isoquinoline 1-oxidoreductase alpha subunit n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U6S5_9PROT
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:EMD83722.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
A1-18-all-fractions_k255_936584_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2224..3093
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUB9_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB56898.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
A1-18-all-fractions_k255_936584_6
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3185..5005
DNA (1821bp) protein (607aa)
UPI0003CFECF2 related cluster n=1 Tax=unknown RepID=UPI0003CFECF2
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_936584_7
unknown

Not on your lists

comp(5031..5264)
DNA (234bp) protein (78aa)

This feature has no annotations

A1-18-all-fractions_k255_936584_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5355..6941)
DNA (1587bp) protein (529aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
lysK; lysine--tRNA ligase (EC:6.1.1.6)
lysyl-tRNA synthetase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030D8637
A1-18-all-fractions_k255_936584_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6983..9679
DNA (2697bp) protein (899aa)
Helicase c2 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3J5_9SPHN
Helicase c2 {ECO:0000313|EMBL:AGH49473.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
helicase c2
A1-18-all-fractions_k255_936584_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9676..10191
DNA (516bp) protein (172aa)
phosphohistidine phosphatase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEA0
putative phosphohistidine phosphatase SixA
Putative phosphohistidine phosphatase SixA {ECO:0000313|EMBL:AGH49472.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_936584_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10188..10628)
DNA (441bp) protein (147aa)
Putative MerR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA6_9SPHN
putative MerR family transcriptional regulator
Putative MerR family transcriptional regulator {ECO:0000313|EMBL:BAK65361.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
A1-18-all-fractions_k255_936584_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10631..10963)
DNA (333bp) protein (111aa)
Integration host factor subunit alpha n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S581_9SPHN
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
integration host factor subunit alpha
A1-18-all-fractions_k255_936584_13
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11071..12030)
DNA (960bp) protein (320aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.180)
3-oxoacyl-ACP synthase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C17
A1-18-all-fractions_k255_936584_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12027..13076)
DNA (1050bp) protein (350aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
phosphate acyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C18
phosphate acyltransferase
A1-18-all-fractions_k255_936584_15
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13093..13272)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002F7D15B
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
rpmF; 50S ribosomal protein L32
A1-18-all-fractions_k255_936584_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13447..13851
DNA (405bp) protein (135aa)
eicosanoid and glutathione metabolism membrane-associated protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA68E
Uncharacterized protein {ECO:0000313|EMBL:GAO55400.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
A1-18-all-fractions_k255_936584_17
unknown

Not on your lists

comp(13841..13993)
DNA (153bp) protein (51aa)
hypothetical protein, partial n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B2EC4B
A1-18-all-fractions_k255_936584_18
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13993..14661)
DNA (669bp) protein (223aa)
beta-lactamase-like protein (EC:3.1.2.6)
Beta-lactamase-like protein n=3 Tax=Sphingobium RepID=D4Z637_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:EQB32756.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
A1-18-all-fractions_k255_936584_19
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14658..15917)
DNA (1260bp) protein (420aa)
Dipeptidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD98_PHEZH
dipeptidase
Dipeptidase {ECO:0000313|EMBL:ACG76702.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_936584_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16000..16239
DNA (240bp) protein (80aa)
Para-aminobenzoate synthase, component I n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTZ4_9SPHN
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:ENY81739.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
aminobenzoate synthetase
A1-18-all-fractions_k255_936584_21
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16236..16898)
DNA (663bp) protein (221aa)
WGS project CABT00000000 data, contig 2.360 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) RepID=F7WCX6_SORMK
Uncharacterized protein {ECO:0000313|EMBL:GAO39922.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
phosphoesterase
A1-18-all-fractions_k255_936584_22
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16942..17283)
DNA (342bp) protein (114aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD04E0
A1-18-all-fractions_k255_936584_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17385..18557
DNA (1173bp) protein (391aa)
cardiolipin synthetase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002881510
cardiolipin synthetase
Cardiolipin synthetase {ECO:0000313|EMBL:AJP74644.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_936584_24
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18554..19195)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X384_9SPHN
methyltransferase
Methyltransferase {ECO:0000313|EMBL:KHA64052.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
A1-18-all-fractions_k255_936584_25
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19337..20665
DNA (1329bp) protein (443aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSQ4_SPHAL
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABF53318.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
A1-18-all-fractions_k255_936584_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20662..22971)
DNA (2310bp) protein (770aa)
ATPase AAA n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A811
AAA ATPase, CDC48 subfamily protein {ECO:0000313|EMBL:EZP50979.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
AAA ATPase
A1-18-all-fractions_k255_936584_27
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23041..23796)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPN5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25927.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
short-chain dehydrogenase
A1-18-all-fractions_k255_936584_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23793..24260)
DNA (468bp) protein (156aa)
Peptidyl-prolyl cis-trans isomerase A {ECO:0000313|EMBL:AKH42275.1}; EC=5.2.1.8 {ECO:0000313|EMBL:AKH42275.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
UPI0003D62913 related cluster n=1 Tax=unknown RepID=UPI0003D62913
cyclophilin type peptidyl-prolyl cis-trans isomerase
A1-18-all-fractions_k255_936584_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24378..25808
DNA (1431bp) protein (477aa)
magnesium transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000313DE5A
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
magnesium transporter
A1-18-all-fractions_k255_936584_30
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25849..26247
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GP68_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB52875.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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