ggKbase home page

A1-18-all-fractions_k255_1243160_27

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 27407..29878

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 835.0
  • Bit_score: 1249
  • Evalue 0.0
DNA topoisomerase I subunit omega (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 833.0
  • Bit_score: 1240
  • Evalue 0.0
DNA topoisomerase 1 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYD0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 833.0
  • Bit_score: 1240
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2472
TTGAAACTCGTCGTCGTCGAATCGCCGGCCAAGGCGAAAACCATCGAGAAGTACTTGGGAAGCGGGCACCGCGTGCTCGCTTCATTCGGACATGTGCGCGATCTTCCCCCGAAGGACGGATCCGTGGATCCAGACCACGACTTCCACATGGAATGGCAAGTTTCGCCTGATCGCGCGAAGCAGCTGCGTGCAATTGCGGACGAAGCGAAGAATGCCGACACGCTGATTCTTGCGACTGACCCGGACCGCGAGGGCGAGGCCATCAGCTGGCATGTCCAGGAAGTGCTGCGGCAGAAAAAAGCGCTCCCATCCAACGTTCAGCGGGTGACCTTCAACGCGATCACGAATTCGGCAGTCACCGAGGCGATGAAGAAGCCCAGGGGCCTCGATGAGGATCTGATCGATGCCTACAGGGCTCGGCGCGCACTTGATTATCTCGTCGGCTTCACACTGTCGCCGATCCTTTGGCGCAAGCTTCCGGGAGCCAAATCGGCGGGACGGGTCCAATCGGTCGCTCTTAGATTGATCGTCGATCGCGAGCGGGAGATCGAGGTCTTCAAGCCGCAGGAATATTGGCAGGTCAGTGCGACCTTCGAGAGTGATGGTCAGCATTTTACCGGCCGCCTAGTTCAGCTGGACGGCAGGAAGATCGAGCGACTGACAATCGGCAATCGCGTCGATGCCGAGGCTGCAAAGGCAGTTCTGGAAGCTGGACGCTTCACCGTGTCCTCGGTCGAGACCAAGCCATTCTCGAAAAATCCCCCGCCACCGTTCACGACCTCTACACTGCAGCAGGAGGCTGCGCGGAAGCTCGGCTTTTCAGCAAGCCACACGATGCGCGTCGCCCAGAGCCTCTACGAGGACGGCCACATTACCTATATGCGGACCGACGGCATCGACATGGCGCCGGAAGCGATCAGCGCTGCGCGTCGAGCCATCGCTACTCGGTATGACGCGGGGTTCGTGCCAGACCGACCGCGTCAGTACACAAGCAAGATCAAGAACGCACAGGAGGCGCACGAAGCGATCCGTCCGACGGACTTCGACCGATCGGGCGCCGCGTCGGGCGATCATTCTCGGCTTTATGAACTGATATACAATCGGGCGCTTGCCAGTCAGATGGCATCCGCCCGGCTCGAGCGCACTACGGTTGAACTGACCGACGGTGCCGGCCGAGCAGTGCTGCGGGCTACGGGGCAGGTCGTACTCTTCCCTGGATATCTCGCGATTTACGAAGAAGGCCGGGACGAAAGAGCCGAGGATGAAGAGGGCGCGCGGATGCCGAGCCTCCGTCAAGGCGATTCGCCCGTGAAGCAGAACGTCGAGGCGACCCAGCATTTCACTCAGCCGCCGCCGCGATATTCCGAGGCGAGCCTCGTGAAGCGCCTCGAAGAACTCGGGATCGGCCGACCTTCGACCTACGCTGCGACACTGCAGACTTTGAAGGATCGCGAATACGTACGGGTTGAAAAGGGCCGCTTCGTGCCGGAGGAAAGTGGGCGCCTCGTCACCGCATTCCTGGAGAGGTTCTTCGAACGTTACGTAAGCTACGATTATACGGCCGAACTCGAAGAGGAGCTGGACGACGTGTCCGGCGGCCGTCTCGATTGGCAAAAATTGCTCGATTCGTTCTGGCGCGATTTCAAGCCCAAGGCCGGCGAGGTCATGGACCAAAAGCCGAGCGAGATCACACAGGCGCTCGACGAATTCCTCGCGCCATGGCTTTACCCGGCACGCGAAGACGGAAGCGACCCACGCGTCTGCCCGCAATGCGGCAACGGCCGGCTGTCGCTACGTGGCGGCCGGTTCGGGGCGTTCGTCGCCTGCTCGAATTATCCGGATTGCCGCTACACACAGAAGTTTGGCCAGGGTGGGGCGCAGGCCGAGAATGAGGGGCCAACCGACCTTGGTGACGGCATCATTCTCAAGAGCGGGCGCTTCGGTCCTTACGTTGAACAGGGTGAGAAGCGCGCTTCCATTCCTAAGGACATTCCGCTTGAGGACGTGAACGTCGACATCGCTCAACGATTGTTGTCCTTGCCGCGTGAGATTGGATCCCACCCAGAAACAGGGAAGCCGATTACAGCTTCAATCGGCCGTTACGGCCCATATCTGGCCCACGACGGCAAATATGCGAAGCTTGGTTCAACCGCTGAGGTCTTCGACACTGGGATGAATGCAGCGGTCGCCAAGCTTGCCGATGCGGCATCCGGGGGTGGACGCCAGCGCGCGGCCTCACGCGAGCCCATCTCGGTTCTCGGCAAGCATCCAAGCAGCGGCGGCGACATCAAGGTCATGGCTGGCCGATATGGCCCGTACGTGACCGATGGCACGACCAATGCCACTCTTCCAAAGGGCACCGATCCCGCAACGATGACGATGGATGAAGCCGTGCGTCTGATCGATGAGCGCGCCGCCAAGGGGCCGGCAAAGAAAGGTGCTCGCAGGTCCTCCCGGAGAAAGCCAAAGTGA
PROTEIN sequence
Length: 824
LKLVVVESPAKAKTIEKYLGSGHRVLASFGHVRDLPPKDGSVDPDHDFHMEWQVSPDRAKQLRAIADEAKNADTLILATDPDREGEAISWHVQEVLRQKKALPSNVQRVTFNAITNSAVTEAMKKPRGLDEDLIDAYRARRALDYLVGFTLSPILWRKLPGAKSAGRVQSVALRLIVDREREIEVFKPQEYWQVSATFESDGQHFTGRLVQLDGRKIERLTIGNRVDAEAAKAVLEAGRFTVSSVETKPFSKNPPPPFTTSTLQQEAARKLGFSASHTMRVAQSLYEDGHITYMRTDGIDMAPEAISAARRAIATRYDAGFVPDRPRQYTSKIKNAQEAHEAIRPTDFDRSGAASGDHSRLYELIYNRALASQMASARLERTTVELTDGAGRAVLRATGQVVLFPGYLAIYEEGRDERAEDEEGARMPSLRQGDSPVKQNVEATQHFTQPPPRYSEASLVKRLEELGIGRPSTYAATLQTLKDREYVRVEKGRFVPEESGRLVTAFLERFFERYVSYDYTAELEEELDDVSGGRLDWQKLLDSFWRDFKPKAGEVMDQKPSEITQALDEFLAPWLYPAREDGSDPRVCPQCGNGRLSLRGGRFGAFVACSNYPDCRYTQKFGQGGAQAENEGPTDLGDGIILKSGRFGPYVEQGEKRASIPKDIPLEDVNVDIAQRLLSLPREIGSHPETGKPITASIGRYGPYLAHDGKYAKLGSTAEVFDTGMNAAVAKLADAASGGGRQRAASREPISVLGKHPSSGGDIKVMAGRYGPYVTDGTTNATLPKGTDPATMTMDEAVRLIDERAAKGPAKKGARRSSRRKPK*