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A1-18-all-fractions_k255_1243160

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1243160_1
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..440
DNA (438bp) protein (146aa)
DNA repair protein RecO n=1 Tax=Sphingobium baderi LL03 RepID=T0HIL1_9SPHN
DNA repair protein RecO {ECO:0000313|EMBL:EQA97398.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
DNA recombination protein RecO
A1-18-all-fractions_k255_1243160_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

466..852
DNA (387bp) protein (129aa)
magnesium transporter ApaG n=1 Tax=Sphingomonas melonis RepID=UPI0003805A3B
magnesium transporter ApaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_1243160_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

966..1742
DNA (777bp) protein (259aa)
serine/threonine protein phosphatase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289A425
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AGH48382.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1243160_4
unknown

Not on your lists

1907..3067
DNA (1161bp) protein (387aa)

This feature has no annotations

A1-18-all-fractions_k255_1243160_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3060..4385
DNA (1326bp) protein (442aa)
O-antigen polymerase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD4B
binding-protein-dependent transport system protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72828.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_1243160_6
unknown

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comp(4435..4701)
DNA (267bp) protein (89aa)

This feature has no annotations

A1-18-all-fractions_k255_1243160_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4875..7250)
DNA (2376bp) protein (792aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E705D7
Uncharacterized protein {ECO:0000313|EMBL:GAO38925.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
diguanylate phosphodiesterase
A1-18-all-fractions_k255_1243160_8
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

7280..8692
DNA (1413bp) protein (471aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RNK2_NEMVE
Predicted protein {ECO:0000313|EMBL:EDO46872.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
putative secreted protein
A1-18-all-fractions_k255_1243160_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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9329..10984
DNA (1656bp) protein (552aa)
Putative hemolysin activation/secretion protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZF60_AZOL4
Conserved protein {ECO:0000313|EMBL:GAK43890.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
putative hemolysin activation/secretion protein
A1-18-all-fractions_k255_1243160_10
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11182..11673)
DNA (492bp) protein (164aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5L5_SPHWW
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KKC23836.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
A1-18-all-fractions_k255_1243160_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11697..12371
DNA (675bp) protein (225aa)
uracil-DNA glycosylase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035E0DD0
Uracil-DNA glycosylase {ECO:0000313|EMBL:KHA64198.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
uracil-DNA glycosylase superfamily protein
A1-18-all-fractions_k255_1243160_12
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12355..13206)
DNA (852bp) protein (284aa)
N-carbamoylputrescine amidase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000369FC79
N-carbamoylputrescine amidase {ECO:0000313|EMBL:KKC23828.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
A1-18-all-fractions_k255_1243160_13
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13203..14189)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF00
Porphyromonas-type peptidyl-arginine deiminase family protein {ECO:0000313|EMBL:EZP50306.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
agmatine deiminase
A1-18-all-fractions_k255_1243160_14
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14287..16275
DNA (1989bp) protein (663aa)
peptidase S9 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6AA65
prolyl oligopeptidase
Tax=BJP_08E140C01_Xanthomonadales_64_42
A1-18-all-fractions_k255_1243160_15
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16331..18442
DNA (2112bp) protein (704aa)
acylamino-acid-releasing enzyme (EC:3.4.19.1)
peptidase S9 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6AA65
Uncharacterized protein {ECO:0000313|EMBL:KFN45799.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
A1-18-all-fractions_k255_1243160_16
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18509..19123)
DNA (615bp) protein (205aa)
UPI0003CFF23F related cluster n=1 Tax=unknown RepID=UPI0003CFF23F
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
30S ribosomal protein S4
A1-18-all-fractions_k255_1243160_17
unknown

Not on your lists

comp(19298..19555)
DNA (258bp) protein (86aa)

This feature has no annotations

A1-18-all-fractions_k255_1243160_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19610..20338)
DNA (729bp) protein (243aa)
rRNA methyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI00035D8426
Sphingomonas taxi strain 30a NODE_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26167.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
rRNA methyltransferase
A1-18-all-fractions_k255_1243160_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20335..20817)
DNA (483bp) protein (161aa)
Transcriptional repressor NrdR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYD9_9SPHN
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1243160_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20821..22140)
DNA (1320bp) protein (440aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F3D
A1-18-all-fractions_k255_1243160_21
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22140..22586)
DNA (447bp) protein (149aa)
Ribose-5-phosphate isomerase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV10_SPHAL
RpiB/LacA/LacB family sugar-phosphate isomerase
RpiB/LacA/LacB family sugar-phosphate isomerase {ECO:0000313|EMBL:AJA08334.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
A1-18-all-fractions_k255_1243160_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22682..23473)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003640A44
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU44217.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
A1-18-all-fractions_k255_1243160_23
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23476..24687)
DNA (1212bp) protein (404aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
5-aminolevulinate synthase (EC:2.3.1.37)
5-aminolevulinate synthase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B598AB
A1-18-all-fractions_k255_1243160_24
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24763..25587)
DNA (825bp) protein (275aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
murI; Glutamate racemase (EC:5.1.1.3)
glutamate racemase n=1 Tax=Sphingobium xenophagum RepID=UPI000377BFB9
A1-18-all-fractions_k255_1243160_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25668..26258
DNA (591bp) protein (197aa)
glycerol-3-phosphate acyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCEEE
glycerol-3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043, ECO:0000313|EMBL:AJP73869.1}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_1243160_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26332..27360)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036DB0AF
Putative oxidoreductase {ECO:0000313|EMBL:GAO38825.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Prolyl 4-hydroxylase alpha subunit
A1-18-all-fractions_k255_1243160_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27407..29878
DNA (2472bp) protein (824aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
DNA topoisomerase I subunit omega (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYD0_9SPHN
A1-18-all-fractions_k255_1243160_28
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

29875..30312
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GN88_SPHAL
deoxyuridine 5'-triphosphate nucleotidohydrolase
A1-18-all-fractions_k255_1243160_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30309..31055
DNA (747bp) protein (249aa)
UPI0003CFC860 related cluster n=1 Tax=unknown RepID=UPI0003CFC860
Molybdopterin synthase sulfurylase MoeB {ECO:0000313|EMBL:GAO38170.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
molybdopterin biosynthesis protein
A1-18-all-fractions_k255_1243160_30
unknown

Not on your lists

comp(31052..31486)
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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