ggKbase home page

A1-18-all-fractions_k255_1494738_18

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 24484..24801

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbC n=1 Tax=Sphingomonas elodea RepID=UPI0002630A75 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 90.0
  • Bit_score: 140
  • Evalue 6.30e-31
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 85.0
  • Bit_score: 130
  • Evalue 2.40e-28
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 86.0
  • Bit_score: 138
  • Evalue 4.40e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Sphingopyxis_65_20 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGCATCCCGGATGTGTTCGTGCGCTTATCGCGGGCGGGGCTTCATTGATTCCGACTGCCGCTTACGCAACCGATTTATACTCTAATCCAGAGGGTTCGGGAGTGATCGTGTCGGCGGTCGGGTGGCTTCAGGGCACTCTACTCGGAACCGTAGCGACGGTTGTTTCCGTAATTGCCATTGCGGCAGTCGGCTTCATGATGCTGACCGGTCGCCTCAACTGGCGATATGGGGCCACGGTTATCCTCGGCTGCTTCATTGTATTCGGAGCCTCGAGCATCGTTGCTGGCATTCATTCCACAGCGACGATCGGTCAGTGA
PROTEIN sequence
Length: 106
MHPGCVRALIAGGASLIPTAAYATDLYSNPEGSGVIVSAVGWLQGTLLGTVATVVSVIAIAAVGFMMLTGRLNWRYGATVILGCFIVFGASSIVAGIHSTATIGQ*