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A1-18-all-fractions_k255_1494738

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1494738_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..4953
DNA (4953bp) protein (1651aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B154_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AGK57209.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
hypothetical protein
A1-18-all-fractions_k255_1494738_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4981..6954
DNA (1974bp) protein (658aa)
Putative DNA or RNA helicase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAQ4_9RHIZ
Putative DNA or RNA helicase
Putative DNA or RNA helicase {ECO:0000313|EMBL:AGK57210.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
A1-18-all-fractions_k255_1494738_3
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7025..8239)
DNA (1215bp) protein (405aa)
UPI0003D6A974 related cluster n=1 Tax=unknown RepID=UPI0003D6A974
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000313|EMBL:AHD02287.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidivorans DSM 14336.;"
A1-18-all-fractions_k255_1494738_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8281..8910
DNA (630bp) protein (210aa)
UPI0003CF4A4E related cluster n=1 Tax=unknown RepID=UPI0003CF4A4E
Uncharacterized protein {ECO:0000313|EMBL:ESY71156.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
A1-18-all-fractions_k255_1494738_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8901..9533
DNA (633bp) protein (211aa)
UPI0003CF4A4E related cluster n=1 Tax=unknown RepID=UPI0003CF4A4E
Uncharacterized protein {ECO:0000313|EMBL:ESY71156.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
A1-18-all-fractions_k255_1494738_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9660..12122
DNA (2463bp) protein (821aa)
Ribosomal protein S1 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NKI4_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KJC49092.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ribosomal protein S1
A1-18-all-fractions_k255_1494738_7
unknown

Not on your lists

comp(12449..12721)
DNA (273bp) protein (91aa)

This feature has no annotations

A1-18-all-fractions_k255_1494738_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12714..13706)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CWL1_CAUCE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_1494738_9
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13703..14623)
DNA (921bp) protein (307aa)
Glycoside hydrolase family 25 n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S3N5_ENTAL
glycoside hydrolase family protein
Glycoside hydrolase family 25 {ECO:0000313|EMBL:AEN63253.1}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
A1-18-all-fractions_k255_1494738_10
unknown

Not on your lists

comp(14627..15052)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037612EE
A1-18-all-fractions_k255_1494738_11
unknown

Not on your lists

comp(15396..15509)
DNA (114bp) protein (38aa)

This feature has no annotations

A1-18-all-fractions_k255_1494738_12
unknown

Not on your lists

comp(15493..15990)
DNA (498bp) protein (166aa)

This feature has no annotations

A1-18-all-fractions_k255_1494738_13
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16357..16734)
DNA (378bp) protein (126aa)
DNA methylase N-4 n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBH9_9RHIZ
DNA methylase N-4
DNA methylase N-4 {ECO:0000313|EMBL:AHB47832.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
A1-18-all-fractions_k255_1494738_14
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17172..18410
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000366728F
Uncharacterized protein {ECO:0000313|EMBL:GAO39034.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hemolysin-type calcium-binding protein
A1-18-all-fractions_k255_1494738_15
unknown

Not on your lists

18442..18738
DNA (297bp) protein (99aa)

This feature has no annotations

A1-18-all-fractions_k255_1494738_16
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19085..19300
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A74
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_1494738_17
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19353..23540
DNA (4188bp) protein (1396aa)
YD repeat-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S464_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_1494738_18
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24484..24801
DNA (318bp) protein (106aa)
conjugal transfer protein TrbC n=1 Tax=Sphingomonas elodea RepID=UPI0002630A75
type VI secretion protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_1494738_19
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24798..25085
DNA (288bp) protein (96aa)
type VI secretion protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A76
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA08924.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
A1-18-all-fractions_k255_1494738_20
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25064..27433
DNA (2370bp) protein (790aa)
type VI secretion protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A77
Type IV secretion system protein VirB4 {ECO:0000313|EMBL:AJA08925.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
type IV secretion system protein VirB4
A1-18-all-fractions_k255_1494738_21
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27430..28632
DNA (1203bp) protein (401aa)
conjugal transfer protein TrbL n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5935F
TrbL/VirB6 plasmid conjugal transfer protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_1494738_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28629..29426
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A79
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70592.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_1494738_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29423..30136
DNA (714bp) protein (238aa)
conjugal transfer protein trbg/virb9/cagx n=1 Tax=Sphingomonas elodea RepID=UPI0002630A7A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70591.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_1494738_24
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30136..31266
DNA (1131bp) protein (377aa)
conjugal transfer protein TrbI n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4A86F
conjugation TrbI family protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_1494738_25
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31263..32279
DNA (1017bp) protein (339aa)
type VI secretion protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A7C
type VI secretion protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_1494738_26
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32276..32635
DNA (360bp) protein (120aa)
conjugal transfer protein Trbc n=1 Tax=Sphingomonas elodea RepID=UPI0002630A7D
Putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AJA08922.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
A1-18-all-fractions_k255_1494738_27
unknown

Not on your lists

comp(32490..32831)
DNA (342bp) protein (114aa)

This feature has no annotations

A1-18-all-fractions_k255_1494738_28
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32876..34066
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2DEN5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK81242.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
A1-18-all-fractions_k255_1494738_29
unknown

Not on your lists

34169..34438
DNA (270bp) protein (90aa)

This feature has no annotations

A1-18-all-fractions_k255_1494738_30
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34538..39067
DNA (4530bp) protein (1510aa)
RHS repeat-associated core domain protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYH8_SPHCR
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEG49180.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
RHS repeat-associated core domain-containing protein
Displaying items 1-30 of 31 in total

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