ggKbase home page

A1-18-all-fractions_k255_1806383_9

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 5789..7075

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 420.0
  • Bit_score: 573
  • Evalue 2.20e-160
diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 420.0
  • Bit_score: 570
  • Evalue 2.90e-160
diaminopimelate decarboxylase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036A2186 similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 421.0
  • Bit_score: 572
  • Evalue 2.00e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGGACCATTTCCAGTTTCGCGCCGGTGAGCTCTATTGCGAGGAGGTGCCACTCGCCGAGATCGCACGGGAGGTCGGCACTCCAGTCTACGTCTATTCGACTGCGACGATGTGCCGCCATGTCGCAGCTCTTCGCGACGCTTTGGAGCCGCTTGAAGAGCCGCTCATCGCCTATGCGGTCAAAGCCAACCCCAACAGTGCTGTTATCGCCACGCTGGCGAGATCAGGACTCGGCGCTGATGTGGTCTCGGGCGGAGAGTATCGGCGGGCACGCGCAGCCGGCGTGGTTCCCGAAAACATCGTATTCTCGGGCGTCGGCAAGACCGAAGAGGAGATGCGCCTTGCGCTCGAGAGCGGGCTTTATCAGTTCAACGTGGAATCGCTTGCCGAAGCGGAGATGCTGTCCTCAGTCGCGATAGCAATGGGCCGGACCGCGCCAATGGGTTTCCGCGTCAATCCGGACGTCGGTGCAGGCGGCCACGCAAAGATCACGACCGGCTCAGCCGACAACAAGTTCGGAATCGCGATCGCTGATGCGCCCGATGCTTATGCGCGCGTCGCCACTCTCCCGGGACTCAAGGTGCGGGGCGTGGCAGTGCACATCGGAAGTCAGCTCACCAGCCTCGATCCTCTCGAGCGGGCGTTTACCCGCGTCGGCGAGCTCATCGGCCATTTGCGCCGATTGGGGCACGATATCGCGGTTGCGGATCTTGGGGGTGGTCTTGGAGTTCCGTACGACCCGCAACAGCCTCCGCCGCCGAGCCCGGCGCAATATGGCGCCATGGTGCGACGGATCACGAACGGTTGGAACGTTCGATTGGTCTTCGAGCCCGGCCGGCTGATTGTTGGTAATGCGGGCGTGCTGCTCTCTCGAGTCATCCGGGTGAAGCCAGGCGCGACCGATCCGTTCGTTATTGTTGATGCGGCCATGAACGATCTGATGCGGCCGGCCCTTTATGACGCCTGGCACAGGATCGAGGCTGTTCGTTACAGGGACTGCAAGTTCACCGCTAACGTGGTCGGACCAGTGTGCGAAACGGGTGACACATTTGCCACCGCGCGCCAGATGGATGAGGTCGCCGCCGGCGATCTTGTCGTCTTCCGAACCGCCGGGGCTTACGCCGCCGCGATGTCGAGTACCTATAATTCGCGACCGCTCACTCCCGAGGTCCTGGTCGATGGTGAACGGTGGGCAGTCGTTCGCCCGCGCCTCGACGTGGACCGCCTCATTGCCACCGACCGAATCCCTGATTGGCTGCGCGGTTGCGCCGACGGAGCCAGCAGCTAA
PROTEIN sequence
Length: 429
MDHFQFRAGELYCEEVPLAEIAREVGTPVYVYSTATMCRHVAALRDALEPLEEPLIAYAVKANPNSAVIATLARSGLGADVVSGGEYRRARAAGVVPENIVFSGVGKTEEEMRLALESGLYQFNVESLAEAEMLSSVAIAMGRTAPMGFRVNPDVGAGGHAKITTGSADNKFGIAIADAPDAYARVATLPGLKVRGVAVHIGSQLTSLDPLERAFTRVGELIGHLRRLGHDIAVADLGGGLGVPYDPQQPPPPSPAQYGAMVRRITNGWNVRLVFEPGRLIVGNAGVLLSRVIRVKPGATDPFVIVDAAMNDLMRPALYDAWHRIEAVRYRDCKFTANVVGPVCETGDTFATARQMDEVAAGDLVVFRTAGAYAAAMSSTYNSRPLTPEVLVDGERWAVVRPRLDVDRLIATDRIPDWLRGCADGASS*