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A1-18-all-fractions_k255_1806383

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1806383_1
unknown

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1..84
DNA (84bp) protein (28aa)

This feature has no annotations

A1-18-all-fractions_k255_1806383_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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370..1326
DNA (957bp) protein (319aa)
NADH dehydrogenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIA7_9SPHN
NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:AGH50317.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1806383_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1344..2153
DNA (810bp) protein (270aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
UDP pyrophosphate phosphatase n=1 Tax=Sphingomonas elodea RepID=UPI0002630CF0
UDP-diphosphatase
A1-18-all-fractions_k255_1806383_4
unknown

Not on your lists

2210..2656
DNA (447bp) protein (149aa)

This feature has no annotations

A1-18-all-fractions_k255_1806383_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2691..3362
DNA (672bp) protein (224aa)
glutathione S-transferase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036DFFC7
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGH51232.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1806383_6
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3400..3783)
DNA (384bp) protein (128aa)
Nuclear protein SET n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCR4_HYPSM
Nuclear protein SET
Nuclear protein SET {ECO:0000313|EMBL:CCB66429.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
A1-18-all-fractions_k255_1806383_7
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3848..4885)
DNA (1038bp) protein (346aa)
rod shape-determining protein MreB n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBCC
Rod shape-determining protein MreB {ECO:0000313|EMBL:KKC23812.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
rod shape-determining protein MreB
A1-18-all-fractions_k255_1806383_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4990..5730)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037D8619
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
3-demethylubiquinone-9 3-methyltransferase
A1-18-all-fractions_k255_1806383_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5789..7075
DNA (1287bp) protein (429aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
diaminopimelate decarboxylase (EC:4.1.1.20)
diaminopimelate decarboxylase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036A2186
A1-18-all-fractions_k255_1806383_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7087..8328
DNA (1242bp) protein (414aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEX5_SPHWW
A1-18-all-fractions_k255_1806383_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8325..9383
DNA (1059bp) protein (353aa)
2-nitropropane dioxygenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B681C2
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABQ70842.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_1806383_12
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9433..11703
DNA (2271bp) protein (757aa)
peptidase n=1 Tax=Sphingomonas elodea RepID=UPI000263132A
Phosphoenolpyruvate-protein phosphotransferase PtsP {ECO:0000313|EMBL:GAM00021.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
phosphoenolpyruvate-protein phosphotransferase PtsP
A1-18-all-fractions_k255_1806383_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11745..12644
DNA (900bp) protein (300aa)
XRE family transcriptional regulator n=2 Tax=Bacteria RepID=UPI0003B6D3ED
putative Xre family transcriptional regulator
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:AGH51005.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1806383_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12676..13650
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000364CB00
TPR repeat containing exported protein
TPR repeat containing exported protein {ECO:0000313|EMBL:AIT08258.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_1806383_15
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13669..14637
DNA (969bp) protein (323aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WKB9_9SPHN
tRNA(Ile)-lysidine synthetase
A1-18-all-fractions_k255_1806383_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14785..16623
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0003614254
Uncharacterized protein {ECO:0000313|EMBL:GAO39115.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_1806383_17
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16731..17063
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MG07_9SPHN
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
A1-18-all-fractions_k255_1806383_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17324..19279
DNA (1956bp) protein (652aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ATP-dependent metalloprotease n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC989
cell division protein FtsH
A1-18-all-fractions_k255_1806383_19
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19359..20384)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ITK4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP84417.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
A1-18-all-fractions_k255_1806383_20
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20445..21107
DNA (663bp) protein (221aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S255_9SPHN
A1-18-all-fractions_k255_1806383_21
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21088..21495
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003823559
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
iojap family protein
A1-18-all-fractions_k255_1806383_22
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21502..22344
DNA (843bp) protein (281aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
beta-lactamase (EC:3.5.2.6)
beta-lactamase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC4C
A1-18-all-fractions_k255_1806383_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22346..22768
DNA (423bp) protein (141aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sphingomonas sp. S17 RepID=F3WZH3_9SPHN
50S rRNA methyltransferase
A1-18-all-fractions_k255_1806383_24
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22772..23950
DNA (1179bp) protein (393aa)
metalloendopeptidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287D41B
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABQ68905.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_1806383_25
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23998..25341
DNA (1344bp) protein (448aa)
Carboxyl-terminal protease n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0W9_9SPHN
Carboxy-terminal-processing protease {ECO:0000313|EMBL:GAL99919.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
carboxyl-terminal protease
A1-18-all-fractions_k255_1806383_26
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25366..25872
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S260_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48569.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1806383_27
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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25869..26405
DNA (537bp) protein (179aa)
ubiquinone biosynthesis protein UbiB n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC992
Ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:KIY10771.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
ubiquinone biosynthesis protein COQ7
A1-18-all-fractions_k255_1806383_28
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

26459..26860
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488FE9
Uncharacterized protein {ECO:0000313|EMBL:KIY10765.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
A1-18-all-fractions_k255_1806383_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26969..28351
DNA (1383bp) protein (461aa)
amino acid transporter n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288A705
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAO39817.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
amino acid/peptide transporter
A1-18-all-fractions_k255_1806383_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28348..29745
DNA (1398bp) protein (466aa)
Amino acid/peptide transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCP4_9SPHN
Amino acid/peptide transporter {ECO:0000313|EMBL:ENY81533.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
amino acid/peptide transporter
Displaying items 1-30 of 33 in total

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