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A1-18-all-fractions_k255_176808

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_176808_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..249)
DNA (249bp) protein (83aa)
TonB-dependent receptor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MS9_RHOP5
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABJ06755.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
A1-18-all-fractions_k255_176808_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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872..1264
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IX1_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ08113.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
A1-18-all-fractions_k255_176808_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1319..1948)
DNA (630bp) protein (210aa)
LuxR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I204_9RHIZ
LuxR family transcriptional regulator {ECO:0000313|EMBL:EHK52993.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LuxR family transcriptional regulator
A1-18-all-fractions_k255_176808_4
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1945..3429)
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
Histidine kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPG9_METNO
histidine kinase
A1-18-all-fractions_k255_176808_5
unknown

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comp(3594..3755)
DNA (162bp) protein (54aa)

This feature has no annotations

A1-18-all-fractions_k255_176808_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3888..5477)
DNA (1590bp) protein (530aa)
Rhodanese domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KJX2_9PROT
Rhodanese domain-containing protein {ECO:0000313|EMBL:EKE77630.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative thiosulfate sulfurtransferase
A1-18-all-fractions_k255_176808_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5697..6239)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRI8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP64544.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
A1-18-all-fractions_k255_176808_8
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6848..7720
DNA (873bp) protein (291aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRF5_9BRAD
ABC transporter {ECO:0000313|EMBL:KJC34390.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ABC transporter ATP-binding protein
A1-18-all-fractions_k255_176808_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7717..9654
DNA (1938bp) protein (646aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJW0_RHOPT
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACF03066.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
A1-18-all-fractions_k255_176808_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9671..10564
DNA (894bp) protein (298aa)
High-affinity branched-chain amino acid transport system permease protein LivH n=1 Tax=Rhodovulum sp. PH10 RepID=J6J7Z4_9RHOB
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:EJW12050.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
inner-membrane translocator
A1-18-all-fractions_k255_176808_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10574..11647
DNA (1074bp) protein (358aa)
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0002F17D01
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:EJW11122.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
inner-membrane translocator
A1-18-all-fractions_k255_176808_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11703..12974
DNA (1272bp) protein (424aa)
Branched-chain amino acid ABC transport system substrate-binding protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LD24_9RHOB
Branched-chain amino acid ABC transport system substrate-binding protein {ECO:0000313|EMBL:EJW11123.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ABC transporter substrate-binding protein
A1-18-all-fractions_k255_176808_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13046..13882
DNA (837bp) protein (279aa)
ABC transporter related protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VMZ0_RHOPX
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADU45858.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
A1-18-all-fractions_k255_176808_14
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14046..15614)
DNA (1569bp) protein (523aa)
indolepyruvate oxidoreductase subunit B (EC:1.2.7.8)
Putative indolepyruvate:ferredoxin oxidoreductase oxidoreductase protein {ECO:0000313|EMBL:CAD15530.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAD15530.1};; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
Indolepyruvate oxidoreductase subunit B n=3 Tax=Ralstonia solanacearum RepID=V5ABJ5_RALSL
A1-18-all-fractions_k255_176808_15
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15623..17776)
DNA (2154bp) protein (718aa)
Thiamine pyrophosphate enzyme-like TPP-binding protein {ECO:0000313|EMBL:ABE46613.1}; EC=1.2.7.8 {ECO:0000313|EMBL:ABE46613.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
thiamine pyrophosphate enzyme-like protein (EC:1.2.7.8)
Thiamine pyrophosphate enzyme-like TPP-binding protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122C9_POLSJ
A1-18-all-fractions_k255_176808_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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17910..18875
DNA (966bp) protein (322aa)
Candidate periplasmic component id=4434774 bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP dicarboxylate transporter subunit DctP
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
A1-18-all-fractions_k255_176808_17
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18914..19429
DNA (516bp) protein (172aa)
Candidate small permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY37_RAMTT
dctM; small permease
Candidate small permease component {ECO:0000313|EMBL:AEG94362.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A1-18-all-fractions_k255_176808_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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19661..20974
DNA (1314bp) protein (438aa)
Candidate large permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY36_RAMTT
fcbT3; large permease
Tax=RBG_16_Betaproteobacteria_66_20_curated
A1-18-all-fractions_k255_176808_19
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20996..21403)
DNA (408bp) protein (136aa)
Blr3438 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89PP2_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ68978.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
A1-18-all-fractions_k255_176808_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21587..23227)
DNA (1641bp) protein (547aa)
Benzoate-CoA ligase family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW29_9RHIZ
Benzoate-CoA ligase family {ECO:0000313|EMBL:EIM28171.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative acid-thiol ligase
A1-18-all-fractions_k255_176808_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23286..24476)
DNA (1191bp) protein (397aa)
Acyl-CoA dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW34_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC75145.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acyl-CoA dehydrogenase domain-containing protein
A1-18-all-fractions_k255_176808_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24478..25311)
DNA (834bp) protein (278aa)
Putative Enoyl-CoA hydratase {ECO:0000313|EMBL:KFC75146.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KFC75146.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EF79_BRASB
A1-18-all-fractions_k255_176808_23
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25308..25820)
DNA (513bp) protein (171aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW32_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM28174.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
transcriptional regulator
A1-18-all-fractions_k255_176808_24
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25820..26578)
DNA (759bp) protein (253aa)
Short-chain alcohol dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW31_9RHIZ
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KFG68994.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
putative oxidoreductase
A1-18-all-fractions_k255_176808_25
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26735..29101
DNA (2367bp) protein (789aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EDP64571.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EDP64571.1};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Enoyl-CoA hydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRM5_9PROT
NADPH dehydrogenase
A1-18-all-fractions_k255_176808_26
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29154..30215
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000368E4A4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK45682.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
A1-18-all-fractions_k255_176808_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30266..31735
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035F1577
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
A1-18-all-fractions_k255_176808_28
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31829..32785
DNA (957bp) protein (319aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ48_THEOJ
monosaccharide ABC transporter membrane protein, CUT2 family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
A1-18-all-fractions_k255_176808_29
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32878..33813
DNA (936bp) protein (312aa)
Periplasmic sugar-binding proteins n=3 Tax=Caldanaerobacter subterraneus RepID=Q8RD41_THETN
RbsB; periplasmic sugar-binding proteins
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
A1-18-all-fractions_k255_176808_30
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33888..34916
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI0002F829DE
Uncharacterized protein {ECO:0000313|EMBL:KJE52996.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
araC-like ligand binding domain protein
Displaying items 1-30 of 89 in total

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