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A1-18-all-fractions_k255_506359

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_506359_1

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comp(1..363)
DNA (363bp) protein (121aa)
2-hydroxychromene-2-carboxylate isomerase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RQS9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKM83657.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DsbA oxidoreductase
A1-18-all-fractions_k255_506359_2
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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564..1535
DNA (972bp) protein (324aa)
MFS transporter n=1 Tax=Cupriavidus sp. WS RepID=UPI00035F830C
MFS transporter {ECO:0000313|EMBL:ESH93662.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
A1-18-all-fractions_k255_506359_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2084..2542)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y182_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93483.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A1-18-all-fractions_k255_506359_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2574..3242)
DNA (669bp) protein (223aa)
glutathione S-transferase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003649604
glutathione S-transferase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
A1-18-all-fractions_k255_506359_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3502..4707
DNA (1206bp) protein (402aa)
Acyl-CoA dehydrogenase type 2 domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CZA0_VARPS
Acyl-CoA dehydrogenase type 2 domain protein
Acyl-CoA dehydrogenase type 2 domain protein {ECO:0000313|EMBL:ACS21908.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A1-18-all-fractions_k255_506359_6
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4720..5442)
DNA (723bp) protein (241aa)
PAP2 (Acid phosphatase) superfamily protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W2U5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ36042.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
phosphoesterase
A1-18-all-fractions_k255_506359_7
unknown

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comp(5564..5743)
DNA (180bp) protein (60aa)

This feature has no annotations

A1-18-all-fractions_k255_506359_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5788..6285)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICB1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65654.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
A1-18-all-fractions_k255_506359_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6287..7576)
DNA (1290bp) protein (430aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWX5_9BRAD
hypothetical protein
A1-18-all-fractions_k255_506359_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7717..8511)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQP7_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62230.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
A1-18-all-fractions_k255_506359_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8949..9575)
DNA (627bp) protein (209aa)
Invasion associated locus B family protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003716D9B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR57137.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
A1-18-all-fractions_k255_506359_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9786..10760
DNA (975bp) protein (325aa)
Alcohol dehydrogenase, zinc-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13D94_RHOPS
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding {ECO:0000313|EMBL:ABE37945.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
A1-18-all-fractions_k255_506359_13
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10803..11195)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z144_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86281.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
A1-18-all-fractions_k255_506359_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11195..11500)
DNA (306bp) protein (102aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3886A
A1-18-all-fractions_k255_506359_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11667..12785
DNA (1119bp) protein (373aa)
Putative zinc metalloprotease n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHP6_9RHOB
Putative zinc metalloprotease {ECO:0000313|EMBL:EJW13044.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
peptidase M50
A1-18-all-fractions_k255_506359_16
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12917..14497
DNA (1581bp) protein (527aa)
Alkaline phosphatase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y4C4_9RHIZ
Alkaline phosphatase {ECO:0000313|EMBL:EMS42007.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
Putative alkaline phosphatase
A1-18-all-fractions_k255_506359_17
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14561..16207)
DNA (1647bp) protein (549aa)
Radical SAM domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IS74_METNO
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACL56886.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
A1-18-all-fractions_k255_506359_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16363..17334)
DNA (972bp) protein (324aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000369321A
Tricarboxylate transport protein TctC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
A1-18-all-fractions_k255_506359_19
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17611..17931
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NDY2_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18522.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
ytnM; Conserved membrane protein YtnM
A1-18-all-fractions_k255_506359_20
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17931..18350
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D4574D
Membrane protein {ECO:0000313|EMBL:KFG70733.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
putative permease
A1-18-all-fractions_k255_506359_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18433..19500)
DNA (1068bp) protein (356aa)
fldW; 4-oxalomesaconate hydratase (EC:4.1.1.45)
4-oxalmesaconate hydratase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HQJ2_9BRAD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 21 items

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