ggKbase home page

A1-18-all-fractions_k255_891269

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_891269_1
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1141..1533)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ML2_CUPPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ65615.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
A1-18-all-fractions_k255_891269_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1682..3049
-----------------
DNA (1368bp)
protein (456aa)
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X045_9BRAD
Tax=RBG_16_Betaproteobacteria_64_18_curated
A1-18-all-fractions_k255_891269_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3061..4227
-----------------
DNA (1167bp)
protein (389aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNR9_PUSST
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN78298.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
A1-18-all-fractions_k255_891269_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4289..5179
-----------------
DNA (891bp)
protein (297aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CWR0_9BRAD
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EJN14264.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
N-acetylmuramoyl-L-alanine amidase
A1-18-all-fractions_k255_891269_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5348..6352
-----------------
DNA (1005bp)
protein (335aa)
3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ITT5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44742.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase
A1-18-all-fractions_k255_891269_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6431..7174)
-----------------
DNA (744bp)
protein (248aa)
Putative enoyl-CoA hydratase/isomerase id=1766858 bin=GWD2_Deltaproteobacteria_55_8 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative enoyl-CoA hydratase/isomerase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
A1-18-all-fractions_k255_891269_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7355..7756
-----------------
DNA (402bp)
protein (134aa)
Putative Acyl-CoA thioesterase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7I9_AZOL4
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EWY39406.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative Acyl-CoA thioesterase
A1-18-all-fractions_k255_891269_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7843..9276
-----------------
DNA (1434bp)
protein (478aa)
asnS; asparagine--tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase id=2439210 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
A1-18-all-fractions_k255_891269_9
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9327..9974
-----------------
DNA (648bp)
protein (216aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACT9_COLFT
Bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:AEK62963.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
A1-18-all-fractions_k255_891269_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10154..11128
-----------------
DNA (975bp)
protein (325aa)
protein bugT id=14627122 bin=bin7_NC10_sister species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
bug43; hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
A1-18-all-fractions_k255_891269_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11220..11843)
-----------------
DNA (624bp)
protein (208aa)
ErfK/YbiS/YcfS/YnhG family protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QFR7_RHOPT
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACF02580.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
A1-18-all-fractions_k255_891269_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11952..13652)
-----------------
DNA (1701bp)
protein (567aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GUM4_9BRAD
Exodeoxyribonuclease III {ECO:0000313|EMBL:KFL26132.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
A1-18-all-fractions_k255_891269_13
unknown

Not on your lists

13889..14419
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

A1-18-all-fractions_k255_891269_14
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14436..15704)
-----------------
DNA (1269bp)
protein (423aa)
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC38430.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Extracellular ligand-binding receptor id=3987077 bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter substrate-binding protein
A1-18-all-fractions_k255_891269_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15897..16871)
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJH2_BRAJP
Signal peptide protein {ECO:0000313|EMBL:KJC56057.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
signal peptide protein
A1-18-all-fractions_k255_891269_16
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16864..19188)
-----------------
DNA (2325bp)
protein (775aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJH3_BRAJP
ABC transporter {ECO:0000313|EMBL:KGT75419.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
A1-18-all-fractions_k255_891269_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19185..20267)
-----------------
DNA (1083bp)
protein (361aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJH4_BRAJP
Multidrug transporter {ECO:0000313|EMBL:KGT75613.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
A1-18-all-fractions_k255_891269_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

20559..21296
-----------------
DNA (738bp)
protein (246aa)
Isochorismatase hydrolase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QLL1_METS6
pncA; isochorismatase hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
A1-18-all-fractions_k255_891269_19
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21360..22103
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C943_METED
Uncharacterized protein {ECO:0000313|EMBL:KFG68351.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
A1-18-all-fractions_k255_891269_20
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22176..22796)
-----------------
DNA (621bp)
protein (207aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
3-isopropylmalate dehydratase small subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T503_9BRAD
leuD; 3-isopropylmalate dehydratase, small subunit
A1-18-all-fractions_k255_891269_21
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22804..24222)
-----------------
DNA (1419bp)
protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
isopropylmalate isomerase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289B3BC
isopropylmalate isomerase large subunit
A1-18-all-fractions_k255_891269_22
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24481..25719
-----------------
DNA (1239bp)
protein (413aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VYD9_9BRAD
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJN11307.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
ABC transporter substrate-binding protein
A1-18-all-fractions_k255_891269_23
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25764..26636
-----------------
DNA (873bp)
protein (291aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I099_9BRAD
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFG68871.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
branched-chain amino acid ABC transporter permease
A1-18-all-fractions_k255_891269_24
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26633..27622
-----------------
DNA (990bp)
protein (330aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7E0_AZOC5
ABC transporter permease {ECO:0000313|EMBL:KFG68870.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
amino acid ABC transporter permease
A1-18-all-fractions_k255_891269_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27615..28373
-----------------
DNA (759bp)
protein (253aa)
Branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA71_AZOL4
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIB13540.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
A1-18-all-fractions_k255_891269_26
bacterium YEK0313, Bacteria

Not on your lists

28366..29079
-----------------
DNA (714bp)
protein (238aa)
Branched-chain amino acid ABC transporter, ATP-binding component (LivF-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZB94_AZOL4
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CEJ12325.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
branched chain amino acid ABC transporter ATPase
A1-18-all-fractions_k255_891269_27
unknown

Not on your lists

comp(29136..29345)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

A1-18-all-fractions_k255_891269_28
Trypanosoma vivax, Trypanosoma, Kinetoplastida, Eukaryota

Not on your lists

29472..31232
-----------------
DNA (1761bp)
protein (587aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Trypanosoma vivax (strain Y486) RepID=F9WMT7_TRYVY
Putative uncharacterized protein {ECO:0000313|EMBL:CCD18851.1}; Flags: Fragment;; TaxID=1055687 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Duttonella.;" source="Trypanosoma vivax (strain Y486).;"
A1-18-all-fractions_k255_891269_29
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31334..32260
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003718604
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:KFG68866.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
prpB; 2-methylisocitrate lyase
A1-18-all-fractions_k255_891269_30
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32320..33831
-----------------
DNA (1512bp)
protein (504aa)
D-hydantoinase n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YMC4_NOSS1
D-hydantoinase
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying items 1-30 of 46 in total

View Taxonomy