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A1-18-all-fractions_k255_1903905

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Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1903905_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..551
DNA (549bp) protein (183aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNT7_9BRAD
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS42489.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative multidrag resistance protein
A1-18-all-fractions_k255_1903905_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

561..3716
DNA (3156bp) protein (1052aa)
Multidrug efflux system protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0U0D0_9BRAD
Multidrug efflux system protein {ECO:0000313|EMBL:CCE12168.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
AcrB/AcrD/AcrF family protein
A1-18-all-fractions_k255_1903905_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4885
DNA (1062bp) protein (354aa)
tol-pal system protein YbgF n=1 Tax=Afipia birgiae RepID=UPI00036E8380
TPR repeat protein {ECO:0000313|EMBL:EAQ36691.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
A1-18-all-fractions_k255_1903905_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4872..6008
DNA (1137bp) protein (379aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM52_AFIFE
tRNA(Ile)-lysidine synthetase
A1-18-all-fractions_k255_1903905_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6112..8031
DNA (1920bp) protein (640aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Rhodovulum sp. PH10 RepID=J6UGJ6_9RHOB
A1-18-all-fractions_k255_1903905_6
Simkania negevensis, Simkania, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8075..9370)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L6Y6_SIMNZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB88496.1}; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
A1-18-all-fractions_k255_1903905_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9468..9950)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IID6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83515.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
Hypothetical protein
A1-18-all-fractions_k255_1903905_8
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10062..10748)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZRX8_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM88985.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
A1-18-all-fractions_k255_1903905_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10780..11937)
DNA (1158bp) protein (386aa)
Major facilitator superfamily n=1 Tax=Rhodovulum sp. PH10 RepID=J5PU24_9RHOB
Major facilitator superfamily {ECO:0000313|EMBL:EJW13237.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
major facilitator transporter
A1-18-all-fractions_k255_1903905_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11975..13510)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHC1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05971.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
A1-18-all-fractions_k255_1903905_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13770..15449
DNA (1680bp) protein (560aa)
Thiamine pyrophosphate-requiring protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6JEB5_9RHOB
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KFG70142.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
thiamine pyrophosphate protein
A1-18-all-fractions_k255_1903905_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15544..16215
DNA (672bp) protein (224aa)
Putative transcriptional regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J6UI64_9RHOB
Putative transcriptional regulator {ECO:0000313|EMBL:EJW13264.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
transcriptional regulator
A1-18-all-fractions_k255_1903905_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16275..17387)
DNA (1113bp) protein (371aa)
Putative glutamate--cysteine ligase 2 {ECO:0000255|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000255|HAMAP-Rule:MF_01609}; Short=GCS 2 {ECO:0000255|HAMAP-Rule:MF_01609};; Short=Gamma-GCS 2 {ECO:0000255|HAMAP-Rule:MF_01609};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Carboxylate-amine ligase AZC_2303 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=CAAL_AZOC5
hypothetical protein
A1-18-all-fractions_k255_1903905_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17575..18396)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UED0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11439.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_1903905_15
Blastochloris viridis, Blastochloris, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18548..18934)
DNA (387bp) protein (129aa)
Cytochrome c2 n=1 Tax=Blastochloris viridis RepID=CYC2_BLAVI
Cytochrome c2; Flags: Precursor;; TaxID=1079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Blastochloris.;" source="Blastochloris viridis (Rhodopseudomonas viridis).;"
cytochrome C
A1-18-all-fractions_k255_1903905_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19257..20750
DNA (1494bp) protein (498aa)
D-lactate dehydrogenase (cytochrome) (EC:1.1.2.4)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:ABE41356.1}; EC=1.1.2.4 {ECO:0000313|EMBL:ABE41356.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130Y3_RHOPS
A1-18-all-fractions_k255_1903905_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20758..21999
DNA (1242bp) protein (414aa)
Glycolate dehydrogenase , FAD-binding subunit GlcE n=1 Tax=Rhodovulum sp. PH10 RepID=J5PL17_9RHOB
Glycolate dehydrogenase , FAD-binding subunit GlcE {ECO:0000313|EMBL:EJW11437.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
FAD linked oxidase domain-containing protein
A1-18-all-fractions_k255_1903905_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22004..23347
DNA (1344bp) protein (448aa)
2-hydroxy-acid oxidase n=1 Tax=Xanthobacteraceae RepID=UPI00037EA1A1
hypothetical protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
A1-18-all-fractions_k255_1903905_19
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23380..23625
DNA (246bp) protein (82aa)
Bll7539 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89DA0_BRADU
histone H1
Bll7539 protein {ECO:0000313|EMBL:BAC52804.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
A1-18-all-fractions_k255_1903905_20

Not on your lists

23974..25050
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 1116 RepID=B8R8Z7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACF98153.1}; TaxID=548899 species="Bacteria; environmental samples.;" source="uncultured bacterium 1116.;"
hypothetical protein
A1-18-all-fractions_k255_1903905_21
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25150..25632)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5V5_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM24946.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
A1-18-all-fractions_k255_1903905_22
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25705..27453)
DNA (1749bp) protein (583aa)
Putative ABC transporter fused ATP-binding and permease components n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A0G6_9BRAD
putative ABC transporter fused ATP-binding and permease components
Putative ABC transporter fused ATP-binding and permease components {ECO:0000313|EMBL:BAM92280.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
A1-18-all-fractions_k255_1903905_23
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27856..28989
DNA (1134bp) protein (378aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366A376
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ETR77899.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
A1-18-all-fractions_k255_1903905_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29081..29749
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWV5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34792.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
TRAP dicarboxylate transporter protein DctQ subunit
A1-18-all-fractions_k255_1903905_25
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29746..31494
DNA (1749bp) protein (583aa)
Possible TRAP C4-dicarboxylate transport system permeaseDctM subunit n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3ME36_RHISN
TRAP dicarboxylate transporter subunit DctM
Possible TRAP C4-dicarboxylate transport system permeaseDctM subunit {ECO:0000313|EMBL:ACP25705.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
A1-18-all-fractions_k255_1903905_26
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31519..32877
DNA (1359bp) protein (453aa)
Amidase id=4334335 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
A1-18-all-fractions_k255_1903905_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33052..33381)
DNA (330bp) protein (110aa)
multidrug transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036394EB
SMR family small multidrug resistance protein {ECO:0000313|EMBL:ERF85212.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
membrane protein
A1-18-all-fractions_k255_1903905_28
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33378..34004)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F9B80
Glutathione S-transferase {ECO:0000313|EMBL:KFI31829.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
glutathione S transferase domain containing protein
A1-18-all-fractions_k255_1903905_29
bacterium YEK0313, Bacteria

Not on your lists

34095..35078
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B8888
HTH-type transcriptional regulator YofA {ECO:0000313|EMBL:CEJ11679.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
A1-18-all-fractions_k255_1903905_30
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35084..35959)
DNA (876bp) protein (292aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ADH87948.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ADH87948.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Carboxymethylenebutenolidase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4Q0_STAND
Displaying items 1-30 of 143 in total

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