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A1-18-all-fractions_k255_2601818

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_2601818_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..772
DNA (771bp) protein (257aa)
Metallopeptidase family M24 protein n=1 Tax=uncultured bacterium CSL12 RepID=G4WVF6_9BACT
pepB5; aminopeptidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
A1-18-all-fractions_k255_2601818_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

779..2062
DNA (1284bp) protein (428aa)
Phosphoenolpyruvate synthase id=4438192 bin=GWC2_Methylomirabilis_70_24 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphoenolpyruvate synthase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
A1-18-all-fractions_k255_2601818_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2062..3045
DNA (984bp) protein (328aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PNC7_9RHOB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
A1-18-all-fractions_k255_2601818_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3071..4033
DNA (963bp) protein (321aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LG23_9RHOB
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EJW11963.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
dehydrogenase
A1-18-all-fractions_k255_2601818_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4073..4840)
DNA (768bp) protein (256aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFH09736.1}; EC=1.1.1.162 {ECO:0000313|EMBL:EFH09736.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSH8_9PROT
short-chain alcohol dehydrogenase
A1-18-all-fractions_k255_2601818_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4883..5296)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000366040B
Lactoylglutathione lyase {ECO:0000313|EMBL:KJC57783.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
lactoylglutathione lyase
A1-18-all-fractions_k255_2601818_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5303..6610)
DNA (1308bp) protein (436aa)
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase id=4253863 bin=GWF2_Methylomirabilis_70_14 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
A1-18-all-fractions_k255_2601818_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6741..7694)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1U6_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH87562.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
A1-18-all-fractions_k255_2601818_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7859..8791)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVE1_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
A1-18-all-fractions_k255_2601818_10
unknown

Not on your lists

comp(8903..9028)
DNA (126bp) protein (42aa)

This feature has no annotations

A1-18-all-fractions_k255_2601818_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9036..11432)
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7I6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36714.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
A1-18-all-fractions_k255_2601818_12
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11542..12030)
DNA (489bp) protein (163aa)
Putative oxidoreductase protein n=1 Tax=Sagittula stellata E-37 RepID=A3K500_9RHOB
Putative oxidoreductase protein {ECO:0000313|EMBL:EBA07601.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
carbon monoxide dehydrogenase small chain CoxS
A1-18-all-fractions_k255_2601818_13
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12027..12869)
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR64124.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=1863205 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carbon monoxide dehydrogenase medium subunit, coxM-like protein
A1-18-all-fractions_k255_2601818_14

Not on your lists

comp(12925..13995)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEE5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AIA11370.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
A1-18-all-fractions_k255_2601818_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14059..14979)
DNA (921bp) protein (307aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PND5_9RHOB
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EJW11967.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
A1-18-all-fractions_k255_2601818_16
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15292..15915
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YR41_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR05788.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
A1-18-all-fractions_k255_2601818_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15938..19507)
DNA (3570bp) protein (1190aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
DNA polymerase III alpha subunit (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UC70_9RHOB
A1-18-all-fractions_k255_2601818_18
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19509..20966)
DNA (1458bp) protein (486aa)
DNA polymerase-like protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LC75_9RHOB
DNA polymerase-like protein {ECO:0000313|EMBL:EJW10878.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
DNA-repair protein
A1-18-all-fractions_k255_2601818_19
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20986..21864)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PIF8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10877.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_2601818_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22022..23152)
DNA (1131bp) protein (377aa)
L-lactate dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00037243DE
FMN-dependent dehydrogenase family protein {ECO:0000313|EMBL:AID31372.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
L-lactate dehydrogenase
A1-18-all-fractions_k255_2601818_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23326..23511
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51244.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
A1-18-all-fractions_k255_2601818_22
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23656..24996
DNA (1341bp) protein (447aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Phosphoglucosamine mutase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIY5_9BRAD
glmM; phosphoglucosamine mutase
A1-18-all-fractions_k255_2601818_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25181..25393
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P342_9BRAD
bacterioferritin-associated
Putative bacterioferritin-associated {ECO:0000313|EMBL:AEI05773.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
A1-18-all-fractions_k255_2601818_24
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25508..25999
DNA (492bp) protein (164aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Bacterioferritin n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILU7_XANP2
bacterioferritin
A1-18-all-fractions_k255_2601818_25
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26166..27338
DNA (1173bp) protein (391aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00019609}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00019609};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
serC; phosphoserine aminotransferase SerC (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIZ3_9BRAD
A1-18-all-fractions_k255_2601818_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27404..28990
DNA (1587bp) protein (529aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFG3_9RHOB
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EJW11974.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
3-phosphoglycerate dehydrogenase
A1-18-all-fractions_k255_2601818_27
unknown

Not on your lists

comp(29001..29192)
DNA (192bp) protein (64aa)

This feature has no annotations

A1-18-all-fractions_k255_2601818_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29668..30960
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P209_9BRAD
A1-18-all-fractions_k255_2601818_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30999..32726
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003637D69
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF03264.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
A1-18-all-fractions_k255_2601818_30
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32866..33774)
DNA (909bp) protein (303aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAS6_9RHOB
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
rpoH; sigma 32
Displaying items 1-30 of 38 in total

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