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A1-18-all-fractions_k255_2790209

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_2790209_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1104
DNA (1104bp) protein (368aa)
Chaperone protein DnaK n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBQ2_9RHOB
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
dnaK; chaperone protein DnaK
A1-18-all-fractions_k255_2790209_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1192..2382
DNA (1191bp) protein (397aa)
Chaperone protein DnaJ n=1 Tax=Rhodovulum sp. PH10 RepID=J6J0N3_9RHOB
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
chaperone protein DnaJ
A1-18-all-fractions_k255_2790209_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2467..3279
DNA (813bp) protein (271aa)
Phospholipid N-methyltransferase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E8J6_BRASB
Methyltransferase {ECO:0000313|EMBL:ETR77727.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
pmtA; phospholipid N-methyltransferase
A1-18-all-fractions_k255_2790209_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3346..3927
DNA (582bp) protein (194aa)
Putative flavoprotein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LBC8_9RHOB
Putative flavoprotein {ECO:0000313|EMBL:EJW10643.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
NADPH-dependent FMN reductase
A1-18-all-fractions_k255_2790209_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3976..4677
DNA (702bp) protein (234aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VI36_RHOPX
A1-18-all-fractions_k255_2790209_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4691..5320
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0H1_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH91292.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
A1-18-all-fractions_k255_2790209_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5432..6247
DNA (816bp) protein (272aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
dapB; dihydrodipicolinate reductase DapB (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PJY6_9RHOB
A1-18-all-fractions_k255_2790209_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6208..7776)
DNA (1569bp) protein (523aa)
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VI33_RHOPX
A1-18-all-fractions_k255_2790209_9
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

8037..9098
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Arthrospira platensis str. Paraca RepID=K6DI35_ARTPT
hypothetical protein
Tax=CG_Cyano_01
A1-18-all-fractions_k255_2790209_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9181..10062)
DNA (882bp) protein (294aa)
Putative methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase) ADA regulatory protein {ECO:0000313|EMBL:CCE06356.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CCE06356.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
6-O-methylguanine-DNA methyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DBECB
transcriptional regulatory protein AraC family
A1-18-all-fractions_k255_2790209_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10143..10652)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXG1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09342.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
A1-18-all-fractions_k255_2790209_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10674..11498
DNA (825bp) protein (275aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Endonuclease III n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q982_RHOPT
endonuclease III
A1-18-all-fractions_k255_2790209_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..13136
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QR74_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06284.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
A1-18-all-fractions_k255_2790209_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13176..13928)
DNA (753bp) protein (251aa)
CysZ n=1 Tax=Afipia birgiae RepID=UPI0002E524E4
Uncharacterized protein {ECO:0000313|EMBL:EKS34737.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
CysZ-like protein
A1-18-all-fractions_k255_2790209_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14119..15483
DNA (1365bp) protein (455aa)
amine oxidase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000374452F
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABD86018.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
A1-18-all-fractions_k255_2790209_16
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15490..17907)
DNA (2418bp) protein (806aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E8L5_BRASB
A1-18-all-fractions_k255_2790209_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18035..19117)
DNA (1083bp) protein (361aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J5PVC5_9RHOB
A1-18-all-fractions_k255_2790209_18
bacterium YEK0313, Bacteria

Not on your lists

comp(19126..20175)
DNA (1050bp) protein (350aa)
(2Fe-2S)-binding protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037C1935
Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1 {ECO:0000313|EMBL:CEJ10599.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Ring-hydroxylating dioxygenase, large terminal subunit
A1-18-all-fractions_k255_2790209_19
unknown

Not on your lists

comp(20205..20705)
DNA (501bp) protein (167aa)
DinB family protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQH1_METTR
DinB family protein {ECO:0000313|EMBL:CPR15261.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
DinB family protein
A1-18-all-fractions_k255_2790209_20
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20761..21120)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUQ1_9BRAD
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
rplT; 50S ribosomal protein L20
A1-18-all-fractions_k255_2790209_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21183..21383)
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QR86_METTR
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
rpmI; 50S ribosomal protein L35
A1-18-all-fractions_k255_2790209_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21658..22185)
DNA (528bp) protein (176aa)
Translation initiation factor IF-3 n=2 Tax=Rhodopseudomonas palustris RepID=B3Q5X4_RHOPT
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000313|EMBL:CAE25484.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
A1-18-all-fractions_k255_2790209_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22323..23525)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003032F86
Glycosyl transferase group 1 {ECO:0000313|EMBL:KFC74187.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
group 1 glycosyl transferase
A1-18-all-fractions_k255_2790209_24
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23644..24417
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z0J5_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86167.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
A1-18-all-fractions_k255_2790209_25
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24425..24769)
DNA (345bp) protein (115aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNH1_CORCM
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AFE06084.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
A1-18-all-fractions_k255_2790209_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24766..25755)
DNA (990bp) protein (330aa)
Nucleoside diphosphate sugar epimerase n=1 Tax=Rhodovulum sp. PH10 RepID=J6JA02_9RHOB
Nucleoside diphosphate sugar epimerase {ECO:0000313|EMBL:EJW12450.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
NAD-dependent epimerase
A1-18-all-fractions_k255_2790209_27
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25722..26720)
DNA (999bp) protein (333aa)
Epoxyqueuosine reductase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07UC3_RHOP5
4Fe-4S ferredoxin {ECO:0000313|EMBL:ETR77705.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
A1-18-all-fractions_k255_2790209_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26864..27556)
DNA (693bp) protein (231aa)
Glutathione S-transferase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR1_NITHX
Glutathione S-transferase {ECO:0000313|EMBL:KIZ32594.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
glutathione S-transferase
A1-18-all-fractions_k255_2790209_29
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27771..28577
DNA (807bp) protein (269aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
UDP pyrophosphate phosphatase n=1 Tax=Afipia birgiae RepID=UPI000311E0BA
A1-18-all-fractions_k255_2790209_30
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28607..29581)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUQ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE10197.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
NAD-dependent epimerase/dehydratase
Displaying items 1-30 of 64 in total

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