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A1-18-all-fractions_k255_3420869

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3420869_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..829
DNA (828bp) protein (276aa)
Transcriptional regulator, AraC family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LAZ2_9RHOB
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EJW10528.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
AraC family transcriptional regulator
A1-18-all-fractions_k255_3420869_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(837..1631)
DNA (795bp) protein (265aa)
3-oxoadipate enol-lactonase n=2 Tax=Bradyrhizobiaceae RepID=K8PDE7_9BRAD
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:EKS37625.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
pcaD; B-ketoadipate enol-lactone hydrolase
A1-18-all-fractions_k255_3420869_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1792..2244
DNA (453bp) protein (151aa)
carbon monoxide dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002D9DABE
Uncharacterized protein {ECO:0000313|EMBL:EKS37623.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
A1-18-all-fractions_k255_3420869_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2418..2909
DNA (492bp) protein (164aa)
carbon monoxide dehydrogenase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003790154
2Fe-2S iron-sulfur cluster binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACA19757.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
A1-18-all-fractions_k255_3420869_5
bacterium YEK0313, Bacteria

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2941..5307
DNA (2367bp) protein (789aa)
carbon-monoxide dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EEECE0
Carbon monoxide dehydrogenase large chain {ECO:0000313|EMBL:CEJ13675.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
aldehyde oxidase/xanthine dehydrogenase
A1-18-all-fractions_k255_3420869_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5319..6116
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P637_9BRAD
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KJC36993.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
FAD-binding molybdopterin dehydrogenase protein
A1-18-all-fractions_k255_3420869_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6214..7164
DNA (951bp) protein (317aa)
Carbon monoxide dehydrogenase D protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J5V0_9RHOB
Carbon monoxide dehydrogenase D protein {ECO:0000313|EMBL:EJW11635.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ATPase
A1-18-all-fractions_k255_3420869_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7190..8473
DNA (1284bp) protein (428aa)
Carbon monoxide dehydrogenase E protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDQ9_9RHOB
Carbon monoxide dehydrogenase E protein {ECO:0000313|EMBL:EJW11636.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
IMP dehydrogenase
A1-18-all-fractions_k255_3420869_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8586..8909
DNA (324bp) protein (108aa)
CO dehydrogenases maturation factor, CoxF family n=1 Tax=Rhodovulum sp. PH10 RepID=J5PLW2_9RHOB
CO dehydrogenases maturation factor, CoxF family {ECO:0000313|EMBL:EJW11637.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_3420869_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9000..9692
DNA (693bp) protein (231aa)
Carbon monoxide dehydrogenase F protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LEW0_9RHOB
Carbon monoxide dehydrogenase F protein {ECO:0000313|EMBL:EJW11638.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
xanthine dehydrogenase accessory factor
A1-18-all-fractions_k255_3420869_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9689..11320
DNA (1632bp) protein (544aa)
MobA-related protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QPE3_9BRAD
MobA-related protein {ECO:0000313|EMBL:EGP06914.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
A1-18-all-fractions_k255_3420869_12
unknown

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comp(11349..11567)
DNA (219bp) protein (73aa)

This feature has no annotations

A1-18-all-fractions_k255_3420869_13
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11853..12518
DNA (666bp) protein (222aa)
Transcriptional regulatory protein TetR family n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G4X9_9BRAD
transcriptional regulatory protein TetR family
Transcriptional regulatory protein TetR family {ECO:0000313|EMBL:EJZ29035.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
A1-18-all-fractions_k255_3420869_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12515..13267
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6IZ82_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10300.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_3420869_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13264..14202
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4W3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37612.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter
A1-18-all-fractions_k255_3420869_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14199..15353
DNA (1155bp) protein (385aa)
ABC-2 type transporter n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07R17_RHOP5
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:ABJ05617.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
A1-18-all-fractions_k255_3420869_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15392..16357)
DNA (966bp) protein (322aa)
Putative permease n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z048_9RHIZ
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFG66788.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
A1-18-all-fractions_k255_3420869_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16439..16900)
DNA (462bp) protein (154aa)
Putative inosine-5'-monophosphate dehydrogenase protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSU2_9BRAD
CBS domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
A1-18-all-fractions_k255_3420869_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17417..19105
DNA (1689bp) protein (563aa)
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase {ECO:0000313|EMBL:ABE64371.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABE64371.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Cytochrome-c oxidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC6_NITHX
A1-18-all-fractions_k255_3420869_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19172..20704)
DNA (1533bp) protein (511aa)
protease Do subfamily (EC:3.4.21.-)
Protease Do subfamily n=2 Tax=Oligotropha carboxidovorans RepID=B6JFF2_OLICO
Putative serine protease, do-like protein {ECO:0000313|EMBL:AEI06206.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
A1-18-all-fractions_k255_3420869_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20962..22152
DNA (1191bp) protein (397aa)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D 1 {ECO:0000255|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D 1 {ECO:0000255|HAMAP-Rule:MF_01358}; NDH-1 subunit D 1 {ECO:0000255|HAMAP-Rule:MF_01358}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
NADH-quinone oxidoreductase subunit D 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=NUOD1_NITHX
A1-18-all-fractions_k255_3420869_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22198..22536
DNA (339bp) protein (113aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UPI0003CE234D related cluster n=1 Tax=unknown RepID=UPI0003CE234D
transcriptional coactivator/pterin dehydratase
A1-18-all-fractions_k255_3420869_23

Not on your lists

22533..23456
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI0003753B29
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48568.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD-dependent epimerase/dehydratase
A1-18-all-fractions_k255_3420869_24
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23645..24859
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000381FE9A
MFS transporter {ECO:0000313|EMBL:KJB93885.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
major facilitator superfamily protein
A1-18-all-fractions_k255_3420869_25
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25021..27660
DNA (2640bp) protein (880aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RNV2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD83640.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
A1-18-all-fractions_k255_3420869_26
unknown

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27740..27910
DNA (171bp) protein (57aa)

This feature has no annotations

A1-18-all-fractions_k255_3420869_27
R_NC10_66_22, NC10, Bacteria

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comp(28055..28816)
DNA (762bp) protein (254aa)
hypothetical protein id=14625980 bin=bin7_NC10_sister species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
A1-18-all-fractions_k255_3420869_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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28988..30052
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FB212
Uncharacterized protein {ECO:0000313|EMBL:EKS34059.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
A1-18-all-fractions_k255_3420869_29
unknown

Not on your lists

30231..30305
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 29 items

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