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A1-18-all-fractions_k255_3578891

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3578891_1

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comp(3..806)
DNA (804bp) protein (268aa)
Luciferase-like monooxygenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEG2_THET1
Luciferase-like monooxygenase {ECO:0000313|EMBL:AIF17567.1}; TaxID=1456289 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_78_A04.;"
luciferase-like monooxygenase
A1-18-all-fractions_k255_3578891_2
unknown

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1251..1358
DNA (108bp) protein (36aa)

This feature has no annotations

A1-18-all-fractions_k255_3578891_3
bacterium YEK0313, Bacteria

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1443..1757
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TV22_TISMK
Cupin domain protein {ECO:0000313|EMBL:CEJ13744.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

1817..2269
DNA (453bp) protein (151aa)
Peptidase S51 dipeptidase E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8L4_9BACT
cyanophycinase
Cyanophycinase {ECO:0000313|EMBL:AIE85506.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
A1-18-all-fractions_k255_3578891_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2385..2675
DNA (291bp) protein (97aa)
Peptidase S51 dipeptidase E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8L4_9BACT
Peptidase S51 dipeptidase E {ECO:0000313|EMBL:EDY17236.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyanophycinase
A1-18-all-fractions_k255_3578891_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2810..3532)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NG53_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29462.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ribonuclease T2 family
A1-18-all-fractions_k255_3578891_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3797..4180)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F263E9
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49483.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
4-oxalocrotonate tautomerase
A1-18-all-fractions_k255_3578891_8
unknown

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comp(4206..4607)
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR17369.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_9
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6949..7911)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000363250B
Putative ABC transporter (Substrate binding protein) {ECO:0000313|EMBL:CCE11854.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
extracellular solute-binding protein
A1-18-all-fractions_k255_3578891_10
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7911..9176)
DNA (1266bp) protein (422aa)
C4-dicarboxylate ABC transporter n=1 Tax=Methylobacterium sp. 88A RepID=UPI000360760B
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EMS39272.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
sodium:dicarboxylate symporter
A1-18-all-fractions_k255_3578891_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9528..9953
DNA (426bp) protein (142aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QCS1_RHOPT
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACF00726.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
A1-18-all-fractions_k255_3578891_12
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10753..11928
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TDA7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04445.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_13
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12000..12416)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489FA5
Uncharacterized protein {ECO:0000313|EMBL:KHK90460.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12599..13030)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000368B4EC
CHRD domain-containing protein {ECO:0000313|EMBL:KIZ36603.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_15
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13289..14218)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037B26BD
Uncharacterized protein {ECO:0000313|EMBL:KGT79340.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
bacterial regulatory helix-turn-helix , lysR family protein
A1-18-all-fractions_k255_3578891_16
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14404..16383
DNA (1980bp) protein (660aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036D0394
Uncharacterized protein {ECO:0000313|EMBL:EPX64737.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
type I phosphodiesterase/nucleotide pyrophosphatase
A1-18-all-fractions_k255_3578891_17
unknown

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comp(16556..16828)
DNA (273bp) protein (91aa)

This feature has no annotations

A1-18-all-fractions_k255_3578891_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16860..19412)
DNA (2553bp) protein (851aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EA136
maltodextrin phosphorylase
A1-18-all-fractions_k255_3578891_19
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19843..20868
DNA (1026bp) protein (342aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Polaromonas sp. CF318 RepID=J2LKB5_9BURK
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:EJL85688.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
family 1 extracellular solute-binding protein
A1-18-all-fractions_k255_3578891_20
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20899..22551
DNA (1653bp) protein (551aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3H3_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHH13681.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
iron ABC transporter permease
A1-18-all-fractions_k255_3578891_21
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22548..23648
DNA (1101bp) protein (367aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
ABC-type spermidine/putrescine transport system, ATPase component n=1 Tax=Polaromonas sp. CF318 RepID=J2L078_9BURK
iron(III) transport system ATP-binding protein
A1-18-all-fractions_k255_3578891_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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23693..24757
DNA (1065bp) protein (355aa)
Putative C4-dicarboxylate transporter n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLH2_9BACT
C4-dicarboxylate transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
A1-18-all-fractions_k255_3578891_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24986..25459
DNA (474bp) protein (158aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Alkylhydroperoxidase-like protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0D7_9SPHN
putative cytoplasmic protein
A1-18-all-fractions_k255_3578891_24
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25459..26316
DNA (858bp) protein (286aa)
RNA polymerase sigma factor SigJ n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X251_RHIFR
RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:KGD91940.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
sigJ; RNA polymerase sigma factor SigJ
A1-18-all-fractions_k255_3578891_25
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26353..27780)
DNA (1428bp) protein (476aa)
sulfatase n=1 Tax=Burkholderia bryophila RepID=UPI0003704EE3
sulfatase
Sulfatase {ECO:0000313|EMBL:ADN61911.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
A1-18-all-fractions_k255_3578891_26
bacterium YEK0313, Bacteria

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comp(27841..28833)
DNA (993bp) protein (331aa)
Uncharacterized protein UPF0065 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7S0_ANADF
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ09996.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(28917..33404)
DNA (4488bp) protein (1496aa)
multi-sensor hybrid histidine kinase n=1 Tax=Ruegeria conchae RepID=UPI000237963F
sensor histidine kinase protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
A1-18-all-fractions_k255_3578891_28
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(33501..34475)
DNA (975bp) protein (325aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035CF79F
Uncharacterized protein {ECO:0000313|EMBL:KFG70764.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_29

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comp(34472..34915)
DNA (444bp) protein (148aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035CF79F
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48904.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
A1-18-all-fractions_k255_3578891_30

Not on your lists

comp(34864..35460)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBE7_METNO
Marine sediment metagenome DNA, contig: S01H1_S20768 {ECO:0000313|EMBL:GAG19725.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying items 1-30 of 70 in total

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