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A1-18-all-fractions_k255_3631276

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3631276_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(48..557)
DNA (510bp) protein (170aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J9A0H7_9RHOB
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EJW09280.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_3631276_2
unknown

Not on your lists

1036..1203
DNA (168bp) protein (56aa)

This feature has no annotations

A1-18-all-fractions_k255_3631276_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1294..1668)
DNA (375bp) protein (125aa)
transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034CBA2A
response regulator receiver protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
A1-18-all-fractions_k255_3631276_4
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2129..3577
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1P1_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14674.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
A1-18-all-fractions_k255_3631276_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3574..4605
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXJ9_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK97924.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
A1-18-all-fractions_k255_3631276_6
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4887..5366
DNA (480bp) protein (160aa)
Blr3042 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QT2_BRADU
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC53586.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
RNA polymerase sigma factor
A1-18-all-fractions_k255_3631276_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5508..6932
DNA (1425bp) protein (475aa)
D-Lactate dehydrogenase, cytochrome c-dependent n=1 Tax=Rhodovulum sp. PH10 RepID=J9DVX2_9RHOB
D-Lactate dehydrogenase, cytochrome c-dependent {ECO:0000313|EMBL:EJW09279.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
FAD linked oxidase domain-containing protein
A1-18-all-fractions_k255_3631276_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7193..10891
DNA (3699bp) protein (1233aa)
membrane protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000377E279
Membrane protein {ECO:0000313|EMBL:ETR79180.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
A1-18-all-fractions_k255_3631276_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10897..11181)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFW7_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66910.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
A1-18-all-fractions_k255_3631276_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11858..12415)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DT62_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW09612.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_3631276_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13110..13757
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P502_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35789.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
A1-18-all-fractions_k255_3631276_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13773..15278
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211X6_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88810.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
A1-18-all-fractions_k255_3631276_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15411..16397
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030D9F4B
Septum site-determining protein MinC {ECO:0000313|EMBL:ERF83332.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
A1-18-all-fractions_k255_3631276_14
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16495..17289
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Thymidylate synthase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SVH8_9BRAD
thyA; thymidylate synthase
A1-18-all-fractions_k255_3631276_15

Not on your lists

17286..17852
DNA (567bp) protein (189aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EPD1_BRASB
A1-18-all-fractions_k255_3631276_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17990..19117
DNA (1128bp) protein (376aa)
HflK protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P717_9BRAD
HflK protein {ECO:0000313|EMBL:EKS35784.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
HflK protein
A1-18-all-fractions_k255_3631276_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19114..20031
DNA (918bp) protein (306aa)
Protein HflC n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PL1_RHOP5
HflC protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
A1-18-all-fractions_k255_3631276_18
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20069..20254
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C314_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM76216.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
unnamed protein product
A1-18-all-fractions_k255_3631276_19
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20410..21897
DNA (1488bp) protein (496aa)
HtrA protease n=1 Tax=Rhodovulum sp. PH10 RepID=J6LDD7_9RHOB
HtrA protease {ECO:0000313|EMBL:EJW11213.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
serine protease
A1-18-all-fractions_k255_3631276_20
bacterium YEK0313, Bacteria

Not on your lists

comp(22146..23069)
DNA (924bp) protein (308aa)
Phosphoserine phosphatase SerB n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CY76_9BRAD
Phosphoserine phosphatase {ECO:0000313|EMBL:CEJ09778.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
serB; phosphoserine phosphatase
A1-18-all-fractions_k255_3631276_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23073..23999
DNA (927bp) protein (309aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=DMAPP:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=DMATase {ECO:0000255|HAMAP-Rule:MF_00185};; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=IPP transferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPPT {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPTase {ECO:0000255|HAMAP-Rule:MF_00185};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
tRNA dimethylallyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MIAA_NITHX
A1-18-all-fractions_k255_3631276_22
bacterium YEK0313, Bacteria

Not on your lists

comp(23927..24814)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IAX5_AZOC5
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000313|EMBL:CEJ15212.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
A1-18-all-fractions_k255_3631276_23
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25203..26963
DNA (1761bp) protein (587aa)
Acetolactate synthase large subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6JAJ6_9RHOB
Acetolactate synthase large subunit {ECO:0000313|EMBL:EJW12560.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
acetolactate synthase large subunit
A1-18-all-fractions_k255_3631276_24
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27226..27762
DNA (537bp) protein (179aa)
Acetolactate synthase small subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFM9_9RHOB
Acetolactate synthase small subunit {ECO:0000313|EMBL:EJW12561.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
acetolactate synthase small subunit
A1-18-all-fractions_k255_3631276_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28087..29106
DNA (1020bp) protein (340aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
ketol-acid reductoisomerase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037FBFF7
A1-18-all-fractions_k255_3631276_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29137..29937
DNA (801bp) protein (267aa)
ABC-type nitrate/sulfonate/bicarbonate transport protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LKK7_9RHOB
ABC-type nitrate/sulfonate/bicarbonate transport protein {ECO:0000313|EMBL:EJW13228.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ABC transporter ATP-binding protein
A1-18-all-fractions_k255_3631276_27
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30017..30586
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JB84_OLICO
hypothetical protein
Phosphatidylethanolamine-binding protein {ECO:0000313|EMBL:AGP44932.1}; TaxID=1348660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica S13.;"
A1-18-all-fractions_k255_3631276_28
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30965..31753
DNA (789bp) protein (263aa)
Hydroxymethylpyrimidine ABC transporter, transmembrane component n=1 Tax=Rhodovulum sp. PH10 RepID=J5PU11_9RHOB
ABC transporter permease {ECO:0000313|EMBL:ETR79217.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter permease
A1-18-all-fractions_k255_3631276_29
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32017..33039
DNA (1023bp) protein (341aa)
NMT1/THI5 like domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3B7_STAND
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR79219.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
NMT1/THI5 like domain-containing protein
A1-18-all-fractions_k255_3631276_30
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33368..35065
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003641FA9
Phosphoglycerol transferase {ECO:0000313|EMBL:KJC52958.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
Displaying items 1-30 of 59 in total

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